RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 C17orf58Q2M2W7 97 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 TMEM69Q5SWH9 247 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 FAM120AOSQ5T036 256 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 C6orf183Q5T699 404 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 C1orf229Q6ZS94 237 aaPredicted RBP11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 LAX1Q8IWV1 398 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 C11orf42Q8N5U0 333 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 TBX15Q96SF7 602 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 C12orf4Q9NQ89 552 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 SIRT7Q9NRC8 400 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 CALYQ9NYX4 217 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 EXTL2Q9UBQ6 330 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 ADAM30Q9UKF2 790 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 F8P00451 2351 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 WNK2Q9Y3S1 2297 aa11.55□□□□□ -0.56
APOBEC3B-202ENST00000335760 TRBV6-6A0A0A6YYG2 114 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 KBTBD11-OT1A0A1B0GTJ5 212 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 RBP4P02753 201 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 RCC1P18754 421 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 PRTN3P24158 256 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 MNDAP41218 407 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 GNG2P59768 71 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 PRB3Q04118 309 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 MADCAM1Q13477 382 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 PNLIPRP3Q17RR3 467 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 PRAMEF5Q5TYX0 476 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 HACD4Q5VWC8 232 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 TRAT1Q6PIZ9 186 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 IL17RELQ6ZVW7 336 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 RFESDQ8TAC1 157 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 ARL11Q969Q4 196 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 UPRTQ96BW1 309 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 MMP27Q9H306 513 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 AUNIPQ9H7T9 357 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 METTL8Q9H825 291 aaKnown RBP11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 MBNL3Q9NUK0 354 aaKnown RBP11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 TMEM160Q9NX00 188 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 KCNIP1Q9NZI2 227 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 MRPS7Q9Y2R9 242 aaKnown RBP11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 ANK3Q12955 4377 aaKnown RBP11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 KIAA2026Q5HYC2 2103 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 C12orf77C9JDV5 145 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 C15orf65H3BRN8 121 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 ORC5O43913 435 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 MMP23AO75900 390 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 CLPXO76031 633 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 FCGR3AP08637 254 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 IGHV1-8P0DP01 117 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 PTHLHP12272 177 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 HNF1AP20823 631 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 OMGP23515 440 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 SSTR5P35346 364 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 LTC4SQ16873 150 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 ZNF880Q6PDB4 577 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 ZNF782Q6ZMW2 699 aaPredicted RBP11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 Q6ZPA2 131 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 PRR18Q8N4B5 295 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 UBALD1Q8TB05 177 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 NUDCD2Q8WVJ2 157 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 LHX4Q969G2 390 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 TAF9BQ9HBM6 251 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 Q9N2K0 584 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 SESN1Q9Y6P5 492 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 A3GALT2U3KPV4 340 aa11.54□□□□□ -0.56
APOBEC3B-202ENST00000335760 IGHV3OR16-10A0A075B7F0 116 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 INAFM1C9JVW0 142 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 NPIPB11E5RHQ5 1161 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 MELTFP08582 738 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 GDNFP39905 211 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 PITPNAQ00169 270 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 KLRD1Q13241 179 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 CNPY1Q3B7I2 92 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 KLF17Q5JT82 389 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 CNIH2Q6PI25 160 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 HEPN1Q6WQI6 88 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 MOB1BQ7L9L4 216 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 C5orf24Q7Z6I8 188 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 PDZD9Q8IXQ8 264 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 OR1L1Q8NH94 360 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 NANPQ8TBE9 248 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 DIRAS2Q96HU8 199 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 SUCNR1Q9BXA5 334 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 LINC00574Q9H8X3 128 aa11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 UNKLQ9H9P5 680 aaKnown RBP11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 ZNF230Q9UIE0 474 aaPredicted RBP11.53□□□□□ -0.56
APOBEC3B-202ENST00000335760 SVEP1Q4LDE5 3571 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 TRAV40A0A0B4J280 105 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 CENPVL3A0A0U1RRI6 287 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 POM121CA8CG34 1229 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 RNASEK-C17orf49H0YIS7 233 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 SPINT2O43291 252 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 SSX5O60225 188 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 HLA-DQB1P01920 261 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 HBZP02008 142 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 HOXB4P17483 251 aaPredicted RBP11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 DTYMKP23919 212 aa11.52□□□□□ -0.57
APOBEC3B-202ENST00000335760 COX7A1P24310 79 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms