RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 SLURP1P55000 103 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 RPS26P62854 115 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ACSM2AQ08AH3 577 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 FUT5Q11128 374 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 STX5Q13190 355 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 FHL1Q13642 323 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CYLC2Q14093 348 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 RBMS2Q15434 407 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 NDUFAF6Q330K2 333 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF829Q3KNS6 432 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ATP6AP1LQ52LC2 224 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 IFI44LQ53G44 452 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TM4SF20Q53R12 229 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ACSM2BQ68CK6 577 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 NANOGP8Q6NSW7 305 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 MOB1BQ7L9L4 216 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 RBM45Q8IUH3 476 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 UEVLDQ8IX04 471 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PUSL1Q8N0Z8 303 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 LNX2Q8N448 690 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PTGR2Q8N8N7 351 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GDPD1Q8N9F7 314 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 C9orf163Q8N9P6 203 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SCCPDHQ8NBX0 429 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 OR13C3Q8NGS6 347 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ACOT12Q8WYK0 555 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GTF2H4Q92759 462 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SGK3Q96BR1 496 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PPCDCQ96CD2 204 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 MRPS24Q96EL2 167 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SMIM8Q96KF7 97 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ATP6V1G3Q96LB4 118 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PRRC1Q96M27 445 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SOSTQ9BQB4 213 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SLC25A33Q9BSK2 321 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 C9orf16Q9BUW7 83 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TAPBPLQ9BX59 468 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GABARAPL3Q9BY60 117 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM231Q9H6L2 316 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 KAT8Q9H7Z6 458 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 NRN1Q9NPD7 142 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 EQTNQ9NQ60 294 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 FGFR1OP2Q9NVK5 253 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 OR6C3Q9NZP0 311 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 NUFIP1Q9UHK0 495 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SMPXQ9UHP9 88 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 BCAP29Q9UHQ4 241 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 MAGEL2Q9UJ55 1249 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SAMD4AQ9UPU9 718 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PPP1R3CQ9UQK1 317 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ANGPT4Q9Y264 503 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 DNAJC15Q9Y5T4 150 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 S4R3C0 116 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PKDREJQ9NTG1 2253 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 IGHV3-20A0A0C4DH32 117 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 EXOC1LA0A1B0GW35 172 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CIB4A0PJX0 185 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 J3QT63 122 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 UBXN8O00124 270 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 HMGN4O00479 90 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 NDUFA4O00483 81 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PRODHO43272 600 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SAP30O75446 220 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SRSF10O75494 262 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TRAPPC6AO75865 159 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SCO1O75880 301 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PAHP00439 452 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 IFNA10P01566 189 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ISG15P05161 165 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF735P0CB33 412 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 FCGR1AP12314 374 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CCNOP22674 350 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PRKACBP22694 351 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 HTR2BP41595 481 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ALDH9A1P49189 494 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 PPM1FP49593 454 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GDI2P50395 445 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CCR9P51686 369 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GNG11P61952 73 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CBX1P83916 185 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TMEM267Q0VDI3 215 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 RAPSNQ13702 412 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 RFX4Q33E94 735 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SMIM21Q3B7S5 101 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 LRRC23Q53EV4 343 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 COA6Q5JTJ3 125 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CGB2Q6NT52 195 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 FAHD2BQ6P2I3 314 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 WDR82Q6UXN9 313 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF600Q6ZNG1 722 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ZNF493Q6ZR52 646 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 SLC25A48Q6ZT89 311 aaKnown RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 Q71RC1 249 aaPredicted RBP1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TCF23Q7RTU1 214 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 CARM1Q86X55 608 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 FUNDC1Q8IVP5 155 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 ADGRG5Q8IZF4 528 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 GCNT2Q8N0V5 402 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 MIER2Q8N344 545 aa1.06□□□□□ -2.24
LINC00643-201ENST00000334389 TEX45Q8NA69 505 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms