RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 IFNA7P01567 189 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 COL10A1Q03692 680 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 SMIM21Q3B7S5 101 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 ZNF565Q8N9K5 539 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 OR10J5Q8NHC4 309 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 WFIKKN1Q96NZ8 548 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 TP53RKQ96S44 253 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 OR2W1Q9Y3N9 320 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 A0A0D9SG52 128 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 GPR31O00270 319 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 OR3A1P47881 315 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 AESQ08117 197 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 HMGN3Q15651 99 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 SLC35E4Q6ICL7 350 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 ACOT7LQ6ZUV0 252 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 LYZL2Q7Z4W2 148 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 MOGAT3Q86VF5 341 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 FAM219AQ8IW50 185 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 FAM185AQ8N0U4 392 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 LHFPL5Q8TAF8 219 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 UBALD1Q8TB05 177 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 ITLN1Q8WWA0 313 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 IL1F10Q8WWZ1 152 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 COQ2Q96H96 371 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 GPHA2Q96T91 129 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 SHARPINQ9H0F6 387 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 GSKIPQ9P0R6 139 aa14.24□□□□□ -0.13
DDX41-201ENST00000330503 TMEM30CPA0ZSE6 113 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 ABCD4O14678 606 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 HSD17B6O14756 317 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 OR2F2O95006 317 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 PSG2P11465 335 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 LYL1P12980 280 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 PRDX2P32119 198 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 BSPH1Q075Z2 132 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 OR2F1Q13607 317 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 IAH1Q2TAA2 248 aaPredicted RBP14.23□□□□□ -0.13
DDX41-201ENST00000330503 TBC1D26Q86UD7 250 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 OR8H3Q8N146 312 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 GCSAMQ8N6F7 178 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 VRK1Q99986 396 aaPredicted RBP14.23□□□□□ -0.13
DDX41-201ENST00000330503 TAF9BQ9HBM6 251 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 UBQLN2Q9UHD9 624 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 KIF25Q9UIL4 384 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 ERRFI1Q9UJM3 462 aaPredicted RBP14.23□□□□□ -0.13
DDX41-201ENST00000330503 C3orf85A0A1B0GTC6 90 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 PHF1O43189 567 aaPredicted RBP14.23□□□□□ -0.13
DDX41-201ENST00000330503 RP2O75695 350 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 LHBP01229 141 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 CA7P43166 264 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 RAB32Q13637 225 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 ZNF345Q14585 488 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 TESK1Q15569 626 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 BEX5Q5H9J7 111 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 KDF1Q8NAX2 398 aaPredicted RBP14.23□□□□□ -0.13
DDX41-201ENST00000330503 OR5AC2Q9NZP5 309 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 MAB21L2Q9Y586 359 aa14.23□□□□□ -0.13
DDX41-201ENST00000330503 IGKV1D-17A0A075B6S4 117 aa14.22□□□□□ -0.13
DDX41-201ENST00000330503 IFNA21P01568 189 aa14.22□□□□□ -0.13
DDX41-201ENST00000330503 IGHV1-46P01743 117 aa14.22□□□□□ -0.13
DDX41-201ENST00000330503 HEXAP06865 529 aa14.22□□□□□ -0.13
DDX41-201ENST00000330503 SELENOVP59797 346 aa14.22□□□□□ -0.13
DDX41-201ENST00000330503 PRR18Q8N4B5 295 aa14.22□□□□□ -0.13
DDX41-201ENST00000330503 ST6GALNAC3Q8NDV1 305 aa14.22□□□□□ -0.13
DDX41-201ENST00000330503 RRNAD1Q96FB5 475 aaKnown RBP14.22□□□□□ -0.13
DDX41-201ENST00000330503 PLCE1Q9P212 2302 aa14.22□□□□□ -0.13
DDX41-201ENST00000330503 GATA4P43694 442 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 PRSS54Q6PEW0 395 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 SSX8Q7RTT4 187 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 LGI3Q8N145 548 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 BOLLQ8N9W6 283 aaKnown RBP14.21□□□□□ -0.13
DDX41-201ENST00000330503 ZZEF1O43149 2961 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 RPS10-NUDT3A0A1W2PQS6 291 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 ZNF737O75373 536 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 PGLYRP1O75594 196 aaPredicted RBP14.21□□□□□ -0.13
DDX41-201ENST00000330503 ID4P47928 161 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 FAM90A1Q86YD7 464 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 DCUN1D4Q92564 292 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 PARP12Q9H0J9 701 aaKnown RBP14.21□□□□□ -0.13
DDX41-201ENST00000330503 TMEM222Q9H0R3 208 aa14.21□□□□□ -0.13
DDX41-201ENST00000330503 SEBOXQ9HB31 216 aaPredicted RBP14.21□□□□□ -0.13
DDX41-201ENST00000330503 POLEQ07864 2286 aa14.21□□□□□ -0.14
DDX41-201ENST00000330503 ICE1Q9Y2F5 2266 aa14.21□□□□□ -0.14
DDX41-201ENST00000330503 IGHV3OR15-7A0A075B7D8 119 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 C12orf77C9JDV5 145 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 IGLV2-14P01704 120 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 GLIPR1P48060 266 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 ADIPOQQ15848 244 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 KIAA2026Q5HYC2 2103 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 SLC51BQ86UW2 128 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 INO80EQ8NBZ0 244 aaPredicted RBP14.2□□□□□ -0.14
DDX41-201ENST00000330503 OR10V1Q8NGI7 309 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 OR1S1Q8NH92 325 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 OR1L1Q8NH94 360 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 PCNPQ8WW12 178 aaKnown RBP14.2□□□□□ -0.14
DDX41-201ENST00000330503 TMEM56Q96MV1 263 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 TMEM56-RWDD3S4R434 201 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 NCOR2Q9Y618 2525 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 B3GALNT1O75752 331 aa14.2□□□□□ -0.14
DDX41-201ENST00000330503 CASP6P55212 293 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms