RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 TEX30Q5JUR7 227 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 SGMS2Q8NHU3 365 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 ZNF596Q8TC21 504 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.25□□□□□ -0.45
EPHB3-201ENST00000330394 FAM206AQ9NX38 181 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 LHFPL6Q9Y693 200 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 FANCMQ8IYD8 2048 aa12.25□□□□□ -0.45
EPHB3-201ENST00000330394 MS4A18H0YCH9 400 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 NGFP01138 241 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 MS4A18Q3C1V0 323 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 GOLT1BQ9Y3E0 138 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 IL2RAP01589 272 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 RPS23P62266 143 aaKnown RBP12.24□□□□□ -0.45
EPHB3-201ENST00000330394 SMAD4Q13485 552 aaKnown RBP12.24□□□□□ -0.45
EPHB3-201ENST00000330394 TBC1D28Q2M2D7 210 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 ZNF488Q96MN9 340 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 KCNK17Q96T54 332 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 A0A1W2PPE3 182 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 A0A1W2PQF6 199 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 CRYM-AS1A6NIL9 109 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 TRAF3IP2O43734 574 aaPredicted RBP12.24□□□□□ -0.45
EPHB3-201ENST00000330394 CYB5R3P00387 301 aaPredicted RBP12.24□□□□□ -0.45
EPHB3-201ENST00000330394 CAMPP49913 170 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 GNG3P63215 75 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 BTNL3Q6UXE8 466 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 OR5D13Q8NGL4 314 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 SSMEM1Q8WWF3 244 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 SMIM8Q96KF7 97 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 RASL10BQ96S79 203 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 DDA1Q9BW61 102 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 DEFB127Q9H1M4 99 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 OR2D2Q9H210 308 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 DOCK8Q8NF50 2099 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 PLCE1Q9P212 2302 aa12.24□□□□□ -0.45
EPHB3-201ENST00000330394 COLCA2A8K830 154 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 LAMTOR5O43504 91 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 FCGR3BO75015 233 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 SCTP09683 121 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 CCKARP32238 428 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 OR3A1P47881 315 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 THBS3P49746 956 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 DSCR4P56555 118 aaPredicted RBP12.23□□□□□ -0.45
EPHB3-201ENST00000330394 PAX5Q02548 391 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 SLC24A4Q8NFF2 622 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 ABHD14AQ9BUJ0 271 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 BCL3P20749 454 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 LSM6P62312 80 aaKnown RBP12.23□□□□□ -0.45
EPHB3-201ENST00000330394 RNASEKQ6P5S7 137 aaKnown RBP12.23□□□□□ -0.45
EPHB3-201ENST00000330394 REC114Q7Z4M0 266 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 OR10G8Q8NGN5 311 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 APOBEC3DQ96AK3 386 aaPredicted RBP12.23□□□□□ -0.45
EPHB3-201ENST00000330394 MYOZ1Q9NP98 299 aaPredicted RBP12.23□□□□□ -0.45
EPHB3-201ENST00000330394 B3GAT1Q9P2W7 334 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 SH3BGRL2Q9UJC5 107 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 PSG11Q9UQ72 335 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 TGFBR3LH3BV60 316 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 PIAS2O75928 621 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 FDX2Q6P4F2 183 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 OR1P1Q8NH06 330 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 OR2V1Q8NHB1 315 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 ZNF519Q8TB69 540 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 FAM117AQ9C073 453 aa12.23□□□□□ -0.45
EPHB3-201ENST00000330394 VSTM5A8MXK1 200 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 M0R1X1 148 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 HSPB1P04792 205 aaKnown RBP12.22□□□□□ -0.45
EPHB3-201ENST00000330394 EGR1P18146 543 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 IER3P46695 156 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 STARD4Q96DR4 205 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 GBF1Q92538 1859 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 TOX4O94842 621 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 LYPD3O95274 346 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 RPLP1P05386 114 aaKnown RBP12.22□□□□□ -0.45
EPHB3-201ENST00000330394 ZNF735P0CB33 412 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 CNN1P51911 297 aaKnown RBP12.22□□□□□ -0.45
EPHB3-201ENST00000330394 MRPL54Q6P161 138 aaKnown RBP12.22□□□□□ -0.45
EPHB3-201ENST00000330394 H1FOOQ8IZA3 346 aaPredicted RBP12.22□□□□□ -0.45
EPHB3-201ENST00000330394 OR5AU1Q8NGC0 362 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 OR10AD1Q8NGE0 317 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 LRFN3Q9BTN0 628 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 PITX3O75364 302 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 SLC35E3Q7Z769 313 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 TECTBQ96PL2 329 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 FAM173AQ9BQD7 235 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 RTBDNQ9BSG5 229 aaPredicted RBP12.22□□□□□ -0.45
EPHB3-201ENST00000330394 SMDT1Q9H4I9 107 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 COA4Q9NYJ1 87 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 ATXN7O15265 892 aaPredicted RBP12.22□□□□□ -0.45
EPHB3-201ENST00000330394 HOXC4P09017 264 aaPredicted RBP12.22□□□□□ -0.45
EPHB3-201ENST00000330394 ACY3Q96HD9 319 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 GABRG3Q99928 467 aa12.22□□□□□ -0.45
EPHB3-201ENST00000330394 TMEM11P17152 192 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 OR10J1P30954 320 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 PCP4P48539 62 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 DCAF12Q5T6F0 453 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 OR10D3Q8NH80 312 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 DMRTA2Q96SC8 542 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 S1PR3Q99500 378 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 TIMP4Q99727 224 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 HSPB9Q9BQS6 159 aa12.21□□□□□ -0.45
EPHB3-201ENST00000330394 TMEM147Q9BVK8 224 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms