RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 APOBEC3DQ96AK3 386 aaPredicted RBP13.14□□□□□ -0.31
BRCC3-201ENST00000330045 PRRG4Q9BZD6 226 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 LRFN1Q9P244 771 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 LINC01387J3KSC0 135 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 BAXQ07812 192 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 RBMS3Q6XE24 437 aaKnown RBP13.14□□□□□ -0.31
BRCC3-201ENST00000330045 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 TMEM217Q8N7C4 229 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 PLPPR1Q8TBJ4 325 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 PSMF1Q92530 271 aa13.14□□□□□ -0.31
BRCC3-201ENST00000330045 GNPNAT1Q96EK6 184 aaPredicted RBP13.14□□□□□ -0.31
BRCC3-201ENST00000330045 BTBD17A6NE02 478 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 WRBO00258 174 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 CHST1O43916 411 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 NXPH3O95157 252 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 S100A9P06702 114 aaKnown RBP13.13□□□□□ -0.31
BRCC3-201ENST00000330045 SMIM6P0DI80 62 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 COX5BP10606 129 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 FOXG1P55316 489 aaPredicted RBP13.13□□□□□ -0.31
BRCC3-201ENST00000330045 FABP9Q0Z7S8 132 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 C6orf15Q6UXA7 325 aaPredicted RBP13.13□□□□□ -0.31
BRCC3-201ENST00000330045 OR5D13Q8NGL4 314 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 MALSU1Q96EH3 234 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 CALHM2Q9HA72 323 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 METTL1Q9UBP6 276 aaKnown RBP13.13□□□□□ -0.31
BRCC3-201ENST00000330045 SLC33A1O00400 549 aaPredicted RBP13.13□□□□□ -0.31
BRCC3-201ENST00000330045 TNFSF12O43508 249 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
BRCC3-201ENST00000330045 PGLYRP1O75594 196 aaPredicted RBP13.13□□□□□ -0.31
BRCC3-201ENST00000330045 LHX2P50458 406 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 OR5A2Q8NGI9 324 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 NANPQ8TBE9 248 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 IL22RA2Q969J5 263 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 HIST1H2AAQ96QV6 131 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 ZNF552Q9H707 407 aaPredicted RBP13.13□□□□□ -0.31
BRCC3-201ENST00000330045 PARD6AQ9NPB6 346 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 KIAA1456Q9P272 454 aa13.13□□□□□ -0.31
BRCC3-201ENST00000330045 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
BRCC3-201ENST00000330045 ZNF503-AS2A6NEH8 195 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 H0Y980 276 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 SYNGR1O43759 233 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 SLC34A2O95436 690 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 NGFP01138 241 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 ZNF806P0C7X5 589 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 OR2B8PP59922 312 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 HIKESHIQ53FT3 197 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 RIMS4Q9H426 269 aaPredicted RBP13.12□□□□□ -0.31
BRCC3-201ENST00000330045 UNKLQ9H9P5 680 aaKnown RBP13.12□□□□□ -0.31
BRCC3-201ENST00000330045 SPENQ96T58 3664 aaKnown RBP13.12□□□□□ -0.31
BRCC3-201ENST00000330045 ZNF292O60281 2723 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 CNOT1A5YKK6 2376 aaKnown RBP13.12□□□□□ -0.31
BRCC3-201ENST00000330045 OR2C1O95371 312 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 JMJD7P0C870 316 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 EPHA1P21709 976 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 MAS1LP35410 378 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 RPS23P62266 143 aaKnown RBP13.12□□□□□ -0.31
BRCC3-201ENST00000330045 ZNF154Q13106 437 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 PCSK4Q6UW60 755 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 SLC16A13Q7RTY0 426 aa13.12□□□□□ -0.31
BRCC3-201ENST00000330045 THOC3Q96J01 351 aaKnown RBP13.12□□□□□ -0.31
BRCC3-201ENST00000330045 DOCK10Q96BY6 2186 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 IGHV2-5P01817 119 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 CELA3AP09093 270 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 RUNX1Q01196 453 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 HAGHQ16775 308 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 AKR1C8PQ5T2L2 129 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 C20orf204Q6ZNR8 217 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 OR2M7Q8NG81 312 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 MRPL30Q8TCC3 161 aaKnown RBP13.11□□□□□ -0.31
BRCC3-201ENST00000330045 FAM173AQ9BQD7 235 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 PLK3Q9H4B4 646 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 TAAR3PQ9P1P4 343 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 RNF115Q9Y4L5 304 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 LIPGQ9Y5X9 500 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 TNRC6AQ8NDV7 1962 aaKnown RBP13.11□□□□□ -0.31
BRCC3-201ENST00000330045 FREM1Q5H8C1 2179 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 RIF1Q5UIP0 2472 aaKnown RBP13.11□□□□□ -0.31
BRCC3-201ENST00000330045 HS3ST1O14792 307 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 SS18L1O75177 396 aaPredicted RBP13.11□□□□□ -0.31
BRCC3-201ENST00000330045 SYNGR4O95473 234 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 CEACAM1P13688 526 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 F2RP25116 425 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 S100GP29377 79 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 PAX9P55771 341 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 CLDN18P56856 261 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 SP5Q6BEB4 398 aaPredicted RBP13.11□□□□□ -0.31
BRCC3-201ENST00000330045 GTF3AQ92664 365 aaKnown RBP13.11□□□□□ -0.31
BRCC3-201ENST00000330045 ZNF703Q9H7S9 590 aaPredicted RBP13.11□□□□□ -0.31
BRCC3-201ENST00000330045 SEBOXQ9HB31 216 aaPredicted RBP13.11□□□□□ -0.31
BRCC3-201ENST00000330045 TMEM9BQ9NQ34 198 aa13.11□□□□□ -0.31
BRCC3-201ENST00000330045 CD300LBA8K4G0 201 aa13.1□□□□□ -0.31
BRCC3-201ENST00000330045 H3BQ15 152 aa13.1□□□□□ -0.31
BRCC3-201ENST00000330045 SRP19P09132 144 aaKnown RBP13.1□□□□□ -0.31
BRCC3-201ENST00000330045 CEBPGP53567 150 aa13.1□□□□□ -0.31
BRCC3-201ENST00000330045 IL24Q13007 206 aa13.1□□□□□ -0.31
BRCC3-201ENST00000330045 LINC00596Q86U02 117 aa13.1□□□□□ -0.31
BRCC3-201ENST00000330045 POM121L2Q96KW2 1035 aa13.1□□□□□ -0.31
BRCC3-201ENST00000330045 ZNF488Q96MN9 340 aa13.1□□□□□ -0.31
BRCC3-201ENST00000330045 YPEL4Q96NS1 127 aa13.1□□□□□ -0.31
BRCC3-201ENST00000330045 ATP5SQ99766 215 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms