RNA–Protein interactions for RNA: ENST00000325599.12

SHQ1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHQ1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-201ENST00000325599 ZDHHC23Q8IYP9 409 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 Q8NFD4 153 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 APH1AQ96BI3 265 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 C12orf49Q9H741 205 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 PARP11Q9NR21 331 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 TNRC6AQ8NDV7 1962 aaKnown RBP14.01□□□□□ -0.17
SHQ1-201ENST00000325599 IGKV1D-13A0A0B4J2D9 117 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 ST8SIA3O43173 380 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 IGKV1-13P0DP09 117 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 RAB5AP20339 215 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 FGF12P61328 243 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 NEK7Q8TDX7 302 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 APOBEC3DQ96AK3 386 aaPredicted RBP14.01□□□□□ -0.17
SHQ1-201ENST00000325599 C2orf88Q9BSF0 95 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 Q9N2K0 584 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 PRSS50Q9UI38 385 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 RFNGQ9Y644 331 aa14.01□□□□□ -0.17
SHQ1-201ENST00000325599 MED12LQ86YW9 2145 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 CD5P06127 495 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 ZNF818PQ6ZRF7 136 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 TBC1D26Q86UD7 250 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 CCDC71LQ8N9Z2 235 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 POM121L2Q96KW2 1035 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 LIPGQ9Y5X9 500 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 GPR137BO60478 399 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 NAPSAO96009 420 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 ARG1P05089 322 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 HIST1H1BP16401 226 aaKnown RBP14□□□□□ -0.17
SHQ1-201ENST00000325599 NDUFA6P56556 154 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 HIKESHIQ53FT3 197 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 HSD17B11Q8NBQ5 300 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 DTD1Q8TEA8 209 aa14□□□□□ -0.17
SHQ1-201ENST00000325599 IGKV1-6A0A0C4DH72 117 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 C20orf204Q6ZNR8 217 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 GAPTQ8N292 157 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 OR4D5Q8NGN0 318 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 IP6K3Q96PC2 410 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 ARV1Q9H2C2 271 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 RIMS4Q9H426 269 aaPredicted RBP13.99□□□□□ -0.17
SHQ1-201ENST00000325599 PLSCR2Q9NRY7 297 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 GAR1Q9NY12 217 aaKnown RBP13.99□□□□□ -0.17
SHQ1-201ENST00000325599 BDP1A6H8Y1 2624 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 FAM157AC9JC47 383 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 TSTD3H0UI37 97 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 SLC33A1O00400 549 aaPredicted RBP13.99□□□□□ -0.17
SHQ1-201ENST00000325599 ZNF883P0CG24 379 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 CD59P13987 128 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 ZNF616Q08AN1 781 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 C17orf78Q8N4C9 275 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 TMEM222Q9H0R3 208 aa13.99□□□□□ -0.17
SHQ1-201ENST00000325599 RYDENQ9NUL5 291 aaKnown RBP13.99□□□□□ -0.17
SHQ1-201ENST00000325599 UBE2J1Q9Y385 318 aaPredicted RBP13.99□□□□□ -0.17
SHQ1-201ENST00000325599 CD300LBA8K4G0 201 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 TRAPPC2LH3BP13 241 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 HSD17B6O14756 317 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 HS3ST1O14792 307 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 PMELP40967 661 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 WNT5AP41221 380 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 GNG10P50151 68 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 MEOX1P50221 254 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 MIDNQ504T8 468 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 ATP1A1-AS1Q5TC04 95 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 KIRREL1Q96J84 757 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 AKR1E2Q96JD6 320 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 GPR87Q9BY21 358 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 MAGT1Q9H0U3 335 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 TMED3Q9Y3Q3 217 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 ASPMQ8IZT6 3477 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 FAM24AA6NFZ4 105 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 NXPH3O95157 252 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 TK1P04183 234 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 RAB4BP61018 213 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 NUTF2P61970 127 aaKnown RBP13.98□□□□□ -0.17
SHQ1-201ENST00000325599 KIAA0141Q14154 515 aaPredicted RBP13.98□□□□□ -0.17
SHQ1-201ENST00000325599 TMEM164Q5U3C3 297 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 DEFB127Q9H1M4 99 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 CCL28Q9NRJ3 127 aa13.98□□□□□ -0.17
SHQ1-201ENST00000325599 FAM212BQ9NTI7 297 aaPredicted RBP13.98□□□□□ -0.17
SHQ1-201ENST00000325599 SLC22A20A6NK97 555 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 TNFSF12O43508 249 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 SS18L1O75177 396 aaPredicted RBP13.97□□□□□ -0.17
SHQ1-201ENST00000325599 P2RY1P47900 373 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 SPATA46Q5T0L3 261 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 DHRS13Q6UX07 377 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 RDH5Q92781 318 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 ABI3Q9P2A4 366 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 A0A1B0GV50 99 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 TRDCB7Z8K6 153 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 M0R036 132 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 IL13RA2Q14627 380 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 CXorf66Q5JRM2 361 aaPredicted RBP13.97□□□□□ -0.17
SHQ1-201ENST00000325599 GPR157Q5UAW9 335 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 ZNF695Q8IW36 515 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 MKXQ8IYA7 352 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 LYPD6BQ8NI32 183 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 FAM86C1Q9NVL1 165 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 POMT1Q9Y6A1 747 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 BORCS7-ASMTA0A0B4J1R7 106 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 FAM90A10PA6NDY2 464 aa13.97□□□□□ -0.17
SHQ1-201ENST00000325599 FAM90A18PA6NE21 464 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms