RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 HMGA2P52926 109 aa14.9□□□□□ -0.02
SMCHD1-201ENST00000320876 TAS2R60P59551 318 aa14.9□□□□□ -0.02
SMCHD1-201ENST00000320876 HOXA4Q00056 320 aaPredicted RBP14.9□□□□□ -0.02
SMCHD1-201ENST00000320876 GFRALQ6UXV0 394 aa14.9□□□□□ -0.02
SMCHD1-201ENST00000320876 MPC1Q9Y5U8 109 aa14.9□□□□□ -0.02
SMCHD1-201ENST00000320876 LRRC75AQ8NAA5 344 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 CDX2Q99626 313 aaPredicted RBP14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 TNFSF15O95150 251 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 FAM209AQ5JX71 171 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 WNK2Q9Y3S1 2297 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 OR2W5A6NFC9 320 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 CDKN2AP42771 156 aaKnown RBP14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 KIR3DL2P43630 455 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 TMEM108Q6UXF1 575 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 OR6X1Q8NH79 312 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 LRRC29Q8WV35 223 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 CADP27708 2225 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 PPYP01298 95 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 ZNF32P17041 273 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 PDCD1Q15116 288 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 SGMS2Q8NHU3 365 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 RFESDQ8TAC1 157 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 CES1P1Q9UKY3 287 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 TRPM3Q9HCF6 1732 aaPredicted RBP14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 DOCK10Q96BY6 2186 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 LMX1BO60663 402 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 DEFB109BQ30KR1 87 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 ASCL3Q9NQ33 180 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 LOC389332A0A1B0GUA5 103 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 CYB5R3P00387 301 aaPredicted RBP14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 KLF9Q13886 244 aaPredicted RBP14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 DTD1Q8TEA8 209 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 ZG16BQ96DA0 208 aa14.89□□□□□ -0.03
SMCHD1-201ENST00000320876 PPP2CBP62714 309 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 GAPTQ8N292 157 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 CYB561D1Q8N8Q1 229 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 MFRPQ9BY79 579 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 CHRNA10Q9GZZ6 450 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 IGHV3-43A0A0B4J1X8 118 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 IGHV3-43DP0DP04 118 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 TMEM211Q6ICI0 200 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 OR2J1Q9GZK6 312 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 HEATR5AQ86XA9 2040 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 RAB29O14966 203 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 GLULP15104 373 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 EWSR1Q01844 656 aaKnown RBP eCLIP14.88□□□□□ -0.031e-6■□□□□ 8.2
SMCHD1-201ENST00000320876 RAB1BQ9H0U4 201 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 CXorf65A6NEN9 183 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 IL19Q9UHD0 177 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 PHF3Q92576 2039 aaKnown RBP14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 KCNE1BA0A087WTH5 132 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 CEACAM5P06731 702 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 PWWP2BQ6NUJ5 590 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 VSIG4Q9Y279 399 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 SERF2P84101 59 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 ZNF841Q6ZN19 808 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 MRGPRX3Q96LB0 322 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 CTLA4P16410 223 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 DDTP30046 118 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 PMELP40967 661 aa14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 MRPL58Q14197 206 aaKnown RBP14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 MRPL30Q8TCC3 161 aaKnown RBP14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 AKIRIN1Q9H9L7 192 aaPredicted RBP14.88□□□□□ -0.03
SMCHD1-201ENST00000320876 TMPRSS2O15393 492 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 VEGFBP49765 207 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 RPS4XP62701 263 aaKnown RBP14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 SLC25A30Q5SVS4 291 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 TRAV38-1A0A0B4J264 116 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 A0A1B0GV72 72 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 PAGE4O60829 102 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 OR8I2Q8N0Y5 310 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 PLPPR5Q32ZL2 321 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 DMKNQ6E0U4 476 aaPredicted RBP14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 ZNF502Q8TBZ5 544 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 CCL17Q92583 94 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 HIST1H4GQ99525 98 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 FRRS1LQ9P0K9 344 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 TRGV8A0A0C4DH27 118 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 H3BMH7 237 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 JOSD1Q15040 202 aaPredicted RBP14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 SPANXN1Q5VSR9 72 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 OR2V2Q96R30 315 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 MRPS16Q9Y3D3 137 aaKnown RBP14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 TMEM50BP56557 158 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 OR4X1Q8NH49 305 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 MRM2Q9UI43 246 aaKnown RBP14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 H7C2G1 150 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 MMP9P14780 707 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 AESQ08117 197 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 ZBTB34Q8NCN2 500 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 OR10D3Q8NH80 312 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 MS4A7Q9GZW8 240 aaPredicted RBP14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 RALGAPA2Q2PPJ7 1873 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 LEMD1Q68G75 181 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 TMEM136Q6ZRR5 245 aa14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 NFAM1Q8NET5 270 aaPredicted RBP14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 RGP1Q92546 391 aaPredicted RBP14.87□□□□□ -0.03
SMCHD1-201ENST00000320876 C3orf80F5H4A9 247 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms