RNA–Protein interactions for RNA: ENST00000319518.12

CPNE7-202, Transcript of copine 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE7, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-202ENST00000319518 PAX9P55771 341 aa17.72■□□□□ 0.43
CPNE7-202ENST00000319518 RAB1AP62820 205 aa17.72■□□□□ 0.43
CPNE7-202ENST00000319518 PRDX4Q13162 271 aa17.72■□□□□ 0.43
CPNE7-202ENST00000319518 C9orf135Q5VTT2 229 aa17.72■□□□□ 0.43
CPNE7-202ENST00000319518 MUCL1Q96DR8 90 aa17.72■□□□□ 0.43
CPNE7-202ENST00000319518 FAM86C1Q9NVL1 165 aa17.72■□□□□ 0.43
CPNE7-202ENST00000319518 BOKQ9UMX3 212 aaPredicted RBP17.72■□□□□ 0.43
CPNE7-202ENST00000319518 ZFHX4Q86UP3 3567 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A10PA6NDY2 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A18PA6NE21 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A16PA6NEW6 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A20PA6NIJ5 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A8PA6NJQ4 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A7PA6NKC0 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A22PA8MWA6 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A12PA8MX19 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A5PA8MXJ8 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A23PA8MXZ1 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 C3orf80F5H4A9 247 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 OR2C1O95371 312 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 SRP19P09132 144 aaKnown RBP17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A15PP0C7V4 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A13PP0C7W8 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A14PP0C7W9 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FAM90A24PP0C7X0 464 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 MAGEA5P43359 124 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FOXG1P55316 489 aaPredicted RBP17.71■□□□□ 0.43
CPNE7-202ENST00000319518 FGF12P61328 243 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 SMDT1Q9H4I9 107 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 ZNF703Q9H7S9 590 aaPredicted RBP17.71■□□□□ 0.43
CPNE7-202ENST00000319518 RNF115Q9Y4L5 304 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 A0A096LPE4 126 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 A0A1W2PPZ6 126 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 ZNF732B4DXR9 585 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 H3BQ15 152 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 PPIHO43447 177 aaKnown RBP17.71■□□□□ 0.43
CPNE7-202ENST00000319518 TNFSF12O43508 249 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 SPINK2P20155 84 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 CCNOP22674 350 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 C20orf204Q6ZNR8 217 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 SPIN2AQ99865 258 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 SPIN2BQ9BPZ2 258 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 PRRG4Q9BZD6 226 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 TAAR3PQ9P1P4 343 aa17.71■□□□□ 0.43
CPNE7-202ENST00000319518 A0A0G2JRQ6 117 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 H0YL77 283 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 ATXN7O15265 892 aaPredicted RBP17.7■□□□□ 0.42
CPNE7-202ENST00000319518 CHST1O43916 411 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 S100A9P06702 114 aaKnown RBP17.7■□□□□ 0.42
CPNE7-202ENST00000319518 ZNF154Q13106 437 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 ICAM4Q14773 271 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 SRSF7Q16629 238 aaKnown RBP eCLIP17.7■□□□□ 0.42
CPNE7-202ENST00000319518 ZNF295-AS1Q8N0V1 137 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 OR8G5Q8NG78 346 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 RAB39BQ96DA2 213 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 FAM173AQ9BQD7 235 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 SLC25A31Q9H0C2 315 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 KIAA1456Q9P272 454 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 AP4M1O00189 453 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 DNAJC13O75165 2243 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 SLC34A2O95436 690 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 VDAC1P21796 283 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 IL22RA1Q8N6P7 574 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 POM121Q96HA1 1249 aa17.7■□□□□ 0.42
CPNE7-202ENST00000319518 PRRC2CQ9Y520 2896 aaKnown RBP17.7■□□□□ 0.42
CPNE7-202ENST00000319518 VAMP2P63027 116 aa17.69■□□□□ 0.42
CPNE7-202ENST00000319518 ARF1P84077 181 aaKnown RBP17.69■□□□□ 0.42
CPNE7-202ENST00000319518 NCMAPQ5T1S8 102 aa17.69■□□□□ 0.42
CPNE7-202ENST00000319518 PCSK4Q6UW60 755 aa17.69■□□□□ 0.42
CPNE7-202ENST00000319518 C1QL4Q86Z23 238 aa17.69■□□□□ 0.42
CPNE7-202ENST00000319518 ABHD14BQ96IU4 210 aa17.69■□□□□ 0.42
CPNE7-202ENST00000319518 URB1O60287 2271 aaKnown RBP17.69■□□□□ 0.42
CPNE7-202ENST00000319518 TXNL1O43396 289 aa17.69■□□□□ 0.42
CPNE7-202ENST00000319518 HLA-HP01893 362 aa17.69■□□□□ 0.42
CPNE7-202ENST00000319518 C3AR1Q16581 482 aa17.69■□□□□ 0.42
CPNE7-202ENST00000319518 CPNE4Q96A23 557 aaPredicted RBP17.69■□□□□ 0.42
CPNE7-202ENST00000319518 TTTY12Q9BZ98 90 aa17.69■□□□□ 0.42
CPNE7-202ENST00000319518 MMP24Q9Y5R2 645 aa17.69■□□□□ 0.42
CPNE7-202ENST00000319518 SYNGR1O43759 233 aa17.68■□□□□ 0.42
CPNE7-202ENST00000319518 CEBPGP53567 150 aa17.68■□□□□ 0.42
CPNE7-202ENST00000319518 ZNF343Q6P1L6 599 aa17.68■□□□□ 0.42
CPNE7-202ENST00000319518 CYB561D1Q8N8Q1 229 aa17.68■□□□□ 0.42
CPNE7-202ENST00000319518 ZNF552Q9H707 407 aaPredicted RBP17.68■□□□□ 0.42
CPNE7-202ENST00000319518 ATP23Q9Y6H3 246 aa17.68■□□□□ 0.42
CPNE7-202ENST00000319518 C5orf49A4QMS7 147 aa17.68■□□□□ 0.42
CPNE7-202ENST00000319518 SCAF4O95104 1147 aaKnown RBP17.68■□□□□ 0.42
CPNE7-202ENST00000319518 LHX2P50458 406 aa17.68■□□□□ 0.42
CPNE7-202ENST00000319518 TRIP6Q15654 476 aaKnown RBP17.68■□□□□ 0.42
CPNE7-202ENST00000319518 CEACAM21Q3KPI0 293 aa17.68■□□□□ 0.42
CPNE7-202ENST00000319518 TMEM45BQ96B21 275 aa17.68■□□□□ 0.42
CPNE7-202ENST00000319518 NOSIPQ9Y314 301 aaKnown RBP17.68■□□□□ 0.42
CPNE7-202ENST00000319518 MRPS18CQ9Y3D5 142 aaKnown RBP17.68■□□□□ 0.42
CPNE7-202ENST00000319518 HSPA12AO43301 675 aa17.67■□□□□ 0.42
CPNE7-202ENST00000319518 PGLYRP1O75594 196 aaPredicted RBP17.67■□□□□ 0.42
CPNE7-202ENST00000319518 NGFP01138 241 aa17.67■□□□□ 0.42
CPNE7-202ENST00000319518 ZNF488Q96MN9 340 aa17.67■□□□□ 0.42
CPNE7-202ENST00000319518 TNRC6AQ8NDV7 1962 aaKnown RBP17.67■□□□□ 0.42
CPNE7-202ENST00000319518 DUXBA0A1W2PPF3 345 aa17.67■□□□□ 0.42
CPNE7-202ENST00000319518 CEACAM1P13688 526 aa17.67■□□□□ 0.42
CPNE7-202ENST00000319518 EIF2S3P41091 472 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms