RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 ARFRP1Q13795 201 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 PAN3Q58A45 887 aaKnown RBP13.48□□□□□ -0.25
TUBB3-201ENST00000315491 PEG10Q86TG7 708 aaKnown RBP13.48□□□□□ -0.25
TUBB3-201ENST00000315491 OR52I2Q8NH67 350 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 SMIM4Q8WVI0 70 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 CHODLQ9H9P2 273 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 ZNF701Q9NV72 531 aaPredicted RBP13.48□□□□□ -0.25
TUBB3-201ENST00000315491 AK3Q9UIJ7 227 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 ZNF98A6NK75 572 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 PCP4L1A6NKN8 68 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 SULT1C2O00338 296 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 CA11O75493 328 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 IGHV4-39P01824 125 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 AMY2BP19961 511 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 RBM39Q14498 530 aaKnown RBP13.48□□□□□ -0.25
TUBB3-201ENST00000315491 BPIFB2Q8N4F0 458 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 NEK7Q8TDX7 302 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 GPX8Q8TED1 209 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 NUDCD2Q8WVJ2 157 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 FCAMRQ8WWV6 532 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 CXorf58Q96LI9 332 aa13.48□□□□□ -0.25
TUBB3-201ENST00000315491 TMEM82A0PJX8 343 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 L7N2F9 121 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 DNASE2O00115 360 aaPredicted RBP13.47□□□□□ -0.25
TUBB3-201ENST00000315491 PSPNO60542 156 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 PEX14O75381 377 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 FSTL3O95633 263 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 LPLP06858 475 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 GIPP09681 153 aaPredicted RBP13.47□□□□□ -0.25
TUBB3-201ENST00000315491 CD3GP09693 182 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 DNM1P46Q6ZS02 220 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 DYRK2Q92630 601 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 SDSLQ96GA7 329 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 CMSS1Q9BQ75 279 aaKnown RBP13.47□□□□□ -0.25
TUBB3-201ENST00000315491 ZNF665Q9H7R5 613 aa13.47□□□□□ -0.25
TUBB3-201ENST00000315491 MYOZ1Q9NP98 299 aaPredicted RBP13.47□□□□□ -0.25
TUBB3-201ENST00000315491 NKX6-3A6NJ46 265 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 PPIHO43447 177 aaKnown RBP13.46□□□□□ -0.25
TUBB3-201ENST00000315491 SSX5O60225 188 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 IGHV2-70P01814 119 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 CXCL2P19875 107 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 TMEM33P57088 247 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 RAP2BP61225 183 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 KLF9Q13886 244 aaPredicted RBP13.46□□□□□ -0.25
TUBB3-201ENST00000315491 ATPAF1Q5TC12 328 aaPredicted RBP13.46□□□□□ -0.25
TUBB3-201ENST00000315491 METTL11BQ5VVY1 283 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 ZNF788Q6ZQV5 615 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 TRAPPC6BQ86SZ2 158 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 RAB1CQ92928 201 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 TIMD4Q96H15 378 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 GAFA1Q96PS6 74 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 CCL13Q99616 98 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 MS4A7Q9GZW8 240 aaPredicted RBP13.46□□□□□ -0.25
TUBB3-201ENST00000315491 DNTTIP1Q9H147 329 aa13.46□□□□□ -0.25
TUBB3-201ENST00000315491 MEIS3P1A6NDR6 274 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 TNFRSF13BO14836 293 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-201ENST00000315491 ZNF737O75373 536 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 PAX1P15863 534 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 MDH2P40926 338 aaKnown RBP13.45□□□□□ -0.26
TUBB3-201ENST00000315491 OR3A1P47881 315 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 AVPI1Q5T686 147 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 C17orf107Q6ZR85 190 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 ZNF561Q8N587 486 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 OR4S1Q8NGB4 309 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 PPP1R35Q8TAP8 253 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 SNX22Q96L94 193 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 HDHD3Q9BSH5 251 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-201ENST00000315491 CHST6Q9GZX3 395 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 C20orf85Q9H1P6 137 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 BARX1Q9HBU1 254 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-201ENST00000315491 A0A1B0GW55 424 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 NAP1L6A6NFF2 107 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 SIGLEC5O15389 551 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 RBBP9O75884 186 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 H2AFB1P0C5Y9 115 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 DUX4L2P0CJ85 424 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 DUX4L3P0CJ86 424 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 DUX4L4P0CJ87 422 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 DUX4L5P0CJ88 424 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 DUX4L6P0CJ89 424 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 DUX4L7P0CJ90 424 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 ATP5J2P56134 94 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 ATXN7L3Q14CW9 347 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-201ENST00000315491 DUX4L9Q6RFH8 374 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-201ENST00000315491 MUC20Q8N307 709 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-201ENST00000315491 ZNRF1Q8ND25 227 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 PIPOXQ9P0Z9 390 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 DUX4Q9UBX2 424 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 KLK11Q9UBX7 282 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 MTFP1Q9UDX5 166 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 EDARQ9UNE0 448 aa13.45□□□□□ -0.26
TUBB3-201ENST00000315491 UTP20O75691 2785 aaKnown RBP13.44□□□□□ -0.26
TUBB3-201ENST00000315491 GDNFP39905 211 aa13.44□□□□□ -0.26
TUBB3-201ENST00000315491 GPR6P46095 362 aaPredicted RBP13.44□□□□□ -0.26
TUBB3-201ENST00000315491 KCNJ3P48549 501 aa13.44□□□□□ -0.26
TUBB3-201ENST00000315491 CCR6P51684 374 aa13.44□□□□□ -0.26
TUBB3-201ENST00000315491 IL13RA1P78552 427 aa13.44□□□□□ -0.26
TUBB3-201ENST00000315491 SLC36A1Q7Z2H8 476 aa13.44□□□□□ -0.26
TUBB3-201ENST00000315491 ZNF525Q8N782 197 aa13.44□□□□□ -0.26
TUBB3-201ENST00000315491 FAM216BQ8N7L0 139 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms