RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 DPPA3Q6W0C5 159 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 SLC35E3Q7Z769 313 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 WNT2BQ93097 391 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 TCFL5Q9UL49 500 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 C11orf94C9JXX5 98 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 CCKARP32238 428 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 RAB7AP51149 207 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 TUSC5Q8IXB3 177 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 TRAV17A0A0B4J275 112 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 IGHV5-10-1A0A0J9YXX1 117 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 CBY3A6NI87 242 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 MMP9P14780 707 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 CHRNB4P30926 498 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 LYG1Q8N1E2 194 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 SMRP1Q8NCR6 262 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 ARRDC1-AS1Q9H2J1 176 aa12.11□□□□□ -0.47
ZNF541-202ENST00000314121 CRYM-AS1A6NIL9 109 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 FBP1P09467 338 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 PMCHP20382 165 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 F2RP25116 425 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 GAS1P54826 345 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 ZNF766Q5HY98 468 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 SPINK14Q6IE38 97 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 CYB561D1Q8N8Q1 229 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 ZNF355PQ9NSJ1 428 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 ATP23Q9Y6H3 246 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 GREB1Q4ZG55 1949 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 CDIPTO14735 213 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 IGKV3-11P04433 115 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 PMELP40967 661 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 GNG4P50150 75 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 SLC24A4Q8NFF2 622 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 HES4Q9HCC6 221 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 HSF4Q9ULV5 492 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 ZNF835Q9Y2P0 537 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 IGHV3-43A0A0B4J1X8 118 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 IGHV3-43DP0DP04 118 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 RUNX1Q01196 453 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 LINC00114Q6XXX2 140 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 MYPOPQ86VE0 399 aaPredicted RBP12.1□□□□□ -0.47
ZNF541-202ENST00000314121 ZBTB34Q8NCN2 500 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 CEP250Q9BV73 2442 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 CTXND1A0A1B0GTU2 59 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 OR5H1A6NKK0 313 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 KIAA1324LA8MWY0 1029 aaPredicted RBP12.1□□□□□ -0.47
ZNF541-202ENST00000314121 SPRY3O43610 288 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 TMEM183BQ1AE95 376 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 TMEM222Q9H0R3 208 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 SH2D2AQ9NP31 389 aa12.1□□□□□ -0.47
ZNF541-202ENST00000314121 TDRD6O60522 2096 aaKnown RBP12.1□□□□□ -0.47
ZNF541-202ENST00000314121 NYNRINQ9P2P1 1898 aaKnown RBP12.09□□□□□ -0.47
ZNF541-202ENST00000314121 RRP8O43159 456 aaKnown RBP12.09□□□□□ -0.47
ZNF541-202ENST00000314121 LYZL6O75951 148 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 SPINK9Q5DT21 86 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 LINC00596Q86U02 117 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 OR10G8Q8NGN5 311 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 OR2I1PQ8NGU4 316 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 MRPL30Q8TCC3 161 aaKnown RBP12.09□□□□□ -0.47
ZNF541-202ENST00000314121 LRRC29Q8WV35 223 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 ABHD14BQ96IU4 210 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 BCL2P10415 239 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 HNRNPA3P51991 378 aaKnown RBP12.09□□□□□ -0.47
ZNF541-202ENST00000314121 ZNF880Q6PDB4 577 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 PPP1R14DQ9NXH3 145 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 ICE1Q9Y2F5 2266 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 TNFRSF1AP19438 455 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 PSG4Q00888 419 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 LYRM2Q9NU23 88 aaPredicted RBP12.09□□□□□ -0.47
ZNF541-202ENST00000314121 ARL2-SNX15V9GYD0 113 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 OOEPA6NGQ2 149 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 TCAPO15273 167 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 IGHMP01871 453 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 PSG2P11465 335 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 CRISP2P16562 243 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 C2orf68Q2NKX9 166 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 MOB3AQ96BX8 217 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 R3HDM4Q96D70 268 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 CXXC4Q9H2H0 198 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 TUBD1Q9UJT1 453 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 A0A0G2JMZ2 1700 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 LRRC37A2A6NM11 1700 aa12.09□□□□□ -0.47
ZNF541-202ENST00000314121 DBX1A6NMT0 343 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 HSPB1P04792 205 aaKnown RBP12.08□□□□□ -0.48
ZNF541-202ENST00000314121 MELTFP08582 738 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 SPINK2P20155 84 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 BMP5P22003 454 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 PAX5Q02548 391 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 VAMP3Q15836 100 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 DHRS11Q6UWP2 260 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 ZNF383Q8NA42 475 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 OR10AD1Q8NGE0 317 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 OR4S2Q8NH73 311 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 IL22RA2Q969J5 263 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 FBXO17Q96EF6 278 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 TMEM74BQ9NUR3 256 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 OR6C3Q9NZP0 311 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 ANK1P16157 1881 aa12.08□□□□□ -0.48
ZNF541-202ENST00000314121 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms