RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 PYY3Q5JQD4 70 aa11.68□□□□□ -0.54
SEC23A-201ENST00000307712 LHFPL1Q86WI0 220 aa11.68□□□□□ -0.54
SEC23A-201ENST00000307712 LYRM2Q9NU23 88 aaPredicted RBP11.68□□□□□ -0.54
SEC23A-201ENST00000307712 BOKQ9UMX3 212 aaPredicted RBP11.68□□□□□ -0.54
SEC23A-201ENST00000307712 FANCMQ8IYD8 2048 aa11.68□□□□□ -0.54
SEC23A-201ENST00000307712 CEP250Q9BV73 2442 aa11.68□□□□□ -0.54
SEC23A-201ENST00000307712 RBM11P57052 281 aaKnown RBP11.67□□□□□ -0.54
SEC23A-201ENST00000307712 RPP30P78346 268 aaKnown RBP11.67□□□□□ -0.54
SEC23A-201ENST00000307712 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
SEC23A-201ENST00000307712 TAAR9Q96RI9 348 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 WISP1O95388 367 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 NTF3P20783 257 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 CXCL12P48061 93 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 EDDM3BP56851 147 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 EDDM3AQ14507 147 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 LURAP1LQ8IV03 231 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 OR4A16Q8NH70 328 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 MRPL30Q8TCC3 161 aaKnown RBP11.67□□□□□ -0.54
SEC23A-201ENST00000307712 PLPPR2Q96GM1 343 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 PCGF1Q9BSM1 259 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 CTDSP1Q9GZU7 261 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 FAM166BA8MTA8 275 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H2BKO60814 126 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H2BJP06899 126 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H2BOP23527 126 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H2BBP33778 126 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H2BDP58876 126 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 CD81P60033 236 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H2BCP62807 126 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 TGFBR3Q03167 851 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST2H2BEQ16778 126 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HEPN1Q6WQI6 88 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H2BHQ93079 126 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H2BNQ99877 126 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H2BMQ99879 126 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 MESP1Q9BRJ9 268 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 RPRMQ9NS64 109 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 FKBP11Q9NYL4 201 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 PRR19A6NJB7 356 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 RAC1P63000 192 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H3AP68431 136 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 OR8G1Q15617 311 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 TMEM164Q5U3C3 297 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 LYSMD4Q5XG99 296 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 APH1AQ96BI3 265 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 NEIL1Q96FI4 390 aaPredicted RBP11.67□□□□□ -0.54
SEC23A-201ENST00000307712 GALNT14Q96FL9 552 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 ANGPTL4Q9BY76 406 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 IL17BQ9UHF5 180 aa11.67□□□□□ -0.54
SEC23A-201ENST00000307712 ARGFXA6NJG6 315 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 CCL3P10147 92 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 SLC10A1Q14973 349 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 CYB5R2Q6BCY4 276 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 GUSBP11Q6P575 273 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 OR2V1Q8NHB1 315 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 KLF2Q9Y5W3 355 aaPredicted RBP11.66□□□□□ -0.54
SEC23A-201ENST00000307712 DENND4CQ5VZ89 1909 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 IGKV3D-11A0A0A0MRZ8 115 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 SPINK4O60575 86 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 PAGE4O60829 102 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 CEACAM6P40199 344 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 CYB561P49447 251 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 DUSP3P51452 185 aaPredicted RBP11.66□□□□□ -0.54
SEC23A-201ENST00000307712 CCL7P80098 99 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 PRAMEF5Q5TYX0 476 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 PRAMEF6Q5VXH4 476 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 CCDC74BQ96LY2 380 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 ZNF391Q9UJN7 358 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 MGST1P10620 155 aaKnown RBP11.66□□□□□ -0.54
SEC23A-201ENST00000307712 HIST1H1BP16401 226 aaKnown RBP11.66□□□□□ -0.54
SEC23A-201ENST00000307712 QRFPP83859 136 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 TGIF2LXQ8IUE1 241 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 KDF1Q8NAX2 398 aaPredicted RBP11.66□□□□□ -0.54
SEC23A-201ENST00000307712 OR1P1Q8NH06 330 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 MUCL1Q96DR8 90 aa11.66□□□□□ -0.54
SEC23A-201ENST00000307712 PLXNA2O75051 1894 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 NPIPB13A6NJU9 1138 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 NPIPB4C9JG80 1138 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 HLA-BQ31612 363 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 SELENOHQ8IZQ5 122 aaKnown RBP11.65□□□□□ -0.54
SEC23A-201ENST00000307712 FAM58AQ8N1B3 248 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 SIGLECL1Q8N7X8 197 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 ZNF488Q96MN9 340 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 SHANK1Q9Y566 2161 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 A0A0J9YW62 118 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 DUXBA0A1W2PPF3 345 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 RPL36A-HNRNPH2H7BZ11 118 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 CXCL1P09341 107 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 NPBWR2P48146 333 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 OR8B8Q15620 311 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 FAM27BQ5VT28 67 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 LINC00696Q6ZRV3 163 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 HLA-CQ95604 372 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 ZNF501Q96CX3 271 aaPredicted RBP11.65□□□□□ -0.54
SEC23A-201ENST00000307712 TECTBQ96PL2 329 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 HIPK2Q9H2X6 1198 aa11.65□□□□□ -0.54
SEC23A-201ENST00000307712 COL4A4P53420 1690 aaPredicted RBP11.65□□□□□ -0.54
SEC23A-201ENST00000307712 RRP8O43159 456 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms