RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PLAURQ03405 335 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 DBX2Q6ZNG2 339 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 MOB1BQ7L9L4 216 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 TMEM222Q9H0R3 208 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 OR2W1Q9Y3N9 320 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 TRBV23-1A0A0A0MS06 115 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 NPIPB13A6NJU9 1138 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 NPIPB4C9JG80 1138 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 SELEP16581 610 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 ZNF17P17021 662 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 NTF3P20783 257 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 FHL1Q13642 323 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 LILRB1Q8NHL6 650 aaPredicted RBP11.53□□□□□ -0.56
DDX54-201ENST00000306014 SIRT7Q9NRC8 400 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 VAX2Q9UIW0 290 aa11.53□□□□□ -0.56
DDX54-201ENST00000306014 PLGLAQ15195 96 aa11.52□□□□□ -0.56
DDX54-201ENST00000306014 MOB3AQ96BX8 217 aa11.52□□□□□ -0.56
DDX54-201ENST00000306014 TRIB1Q96RU8 372 aa11.52□□□□□ -0.56
DDX54-201ENST00000306014 GPR87Q9BY21 358 aa11.52□□□□□ -0.56
DDX54-201ENST00000306014 NAT8Q9UHE5 227 aa11.52□□□□□ -0.56
DDX54-201ENST00000306014 OR5B21A6NL26 309 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 HSBP1L1C9JCN9 74 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 STARD6P59095 220 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 RND3P61587 244 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 KHDC3LQ587J8 217 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 OR10A7Q8NGE5 316 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 DAZAP1Q96EP5 407 aaKnown RBP11.52□□□□□ -0.57
DDX54-201ENST00000306014 TAAR6Q96RI8 345 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 PSG11Q9UQ72 335 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 ELOA3CA0A087WX78 387 aaPredicted RBP11.52□□□□□ -0.57
DDX54-201ENST00000306014 TIAF1O95411 115 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 LINC00271P0C7V0 271 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 PAX6P26367 422 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 Q3ZCU0 254 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 FAM78BQ5VT40 261 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 Q8IYB0 196 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 S1PR3Q99500 378 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 ZNF665Q9H7R5 613 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 SH3BGRL2Q9UJC5 107 aa11.52□□□□□ -0.57
DDX54-201ENST00000306014 B4DEV8 164 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 NPIPB7O75200 414 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 IGHV3-13P01766 116 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 IGHV3-7P01780 117 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 FBP1P09467 338 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 MMP9P14780 707 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 HLA-GP17693 338 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 TMEM187Q14656 261 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 C3AR1Q16581 482 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 TIGITQ495A1 244 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 BIVMQ86UB2 503 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 M1APQ8TC57 530 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 EDARADDQ8WWZ3 215 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 SMDT1Q9H4I9 107 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 LINC01387J3KSC0 135 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 M0R1X1 148 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 G0S2P27469 103 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 GABRA4P48169 554 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 BTNL3Q6UXE8 466 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 RBMXL3Q8N7X1 1067 aaKnown RBP11.51□□□□□ -0.57
DDX54-201ENST00000306014 MRGPRDQ8TDS7 321 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 SNRNP200O75643 2136 aaKnown RBP11.51□□□□□ -0.57
DDX54-201ENST00000306014 PHF3Q92576 2039 aaKnown RBP11.51□□□□□ -0.57
DDX54-201ENST00000306014 OR5H1A6NKK0 313 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 CDIPTO14735 213 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 FCGR3BO75015 233 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 CDC34P49427 236 aaPredicted RBP11.51□□□□□ -0.57
DDX54-201ENST00000306014 TMEM230Q96A57 120 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 SMIM8Q96KF7 97 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 MESP1Q9BRJ9 268 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 SMOC1Q9H4F8 434 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 MPC1Q9Y5U8 109 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 PQLC2LA1A4F0 135 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 F2RP25116 425 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 MDH2P40926 338 aaKnown RBP11.51□□□□□ -0.57
DDX54-201ENST00000306014 OR2T10Q8NGZ9 312 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 NEIL1Q96FI4 390 aaPredicted RBP11.51□□□□□ -0.57
DDX54-201ENST00000306014 MEGF10Q96KG7 1140 aa11.51□□□□□ -0.57
DDX54-201ENST00000306014 AURKAIP1Q9NWT8 199 aaPredicted RBP11.51□□□□□ -0.57
DDX54-201ENST00000306014 ICE1Q9Y2F5 2266 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 PTBP3O95758 552 aaKnown RBP11.5□□□□□ -0.57
DDX54-201ENST00000306014 IQCJQ1A5X6 159 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 IZUMO4Q1ZYL8 232 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 ALKBH6Q3KRA9 238 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 MRGPRGQ86SM5 289 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 OR4A4PQ8NGN8 299 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 ZNF331Q9NQX6 463 aaPredicted RBP11.5□□□□□ -0.57
DDX54-201ENST00000306014 FZR1Q9UM11 496 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 A0A1B0GU03 582 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 LOC390937A0A1W2PQ73 354 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 SPINK4O60575 86 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 SPEM2Q0P670 501 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 SMIM21Q3B7S5 101 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 ASPHD2Q6ICH7 369 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 TOMM20LQ6UXN7 152 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 SIGLECL1Q8N7X8 197 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 TMEM147Q9BVK8 224 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 OR51M1Q9H341 326 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 DOK5Q9P104 306 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 ZNF319Q9P2F9 582 aa11.5□□□□□ -0.57
DDX54-201ENST00000306014 ENSAO43768 121 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms