RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 MMP16P51512 607 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 CD300CQ08708 224 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 TMEM108Q6UXF1 575 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 LRRC29Q8WV35 223 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 SLC25A33Q9BSK2 321 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 LGALS7P47929 136 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 SMUG1Q53HV7 270 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 SMIM12Q96EX1 92 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 IL19Q9UHD0 177 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 SCN10AQ9Y5Y9 1956 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 F5H697 171 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 PLA2G10O15496 165 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 SIAH2O43255 324 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 TMEM255AQ5JRV8 349 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 C1QTNF12Q5T7M4 302 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 GAPTQ8N292 157 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 GVQW1Q8N7I0 195 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 LILRB1Q8NHL6 650 aaPredicted RBP6.72□□□□□ -1.33
SF3B3-201ENST00000302516 SLC25A40Q8TBP6 338 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 MOGAT1Q96PD6 335 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 PIPOXQ9P0Z9 390 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 CAMPP49913 170 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 POLR2GP62487 172 aaKnown RBP eCLIP6.72□□□□□ -1.33
SF3B3-201ENST00000302516 ZFP64Q9NPA5 681 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 CLEC1BQ9P126 229 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 C1QAP02745 245 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 NGFRP08138 427 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 TCTN1Q2MV58 587 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 LINC01555Q8NAE3 123 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 CASP8AP2Q9UKL3 1982 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 TRPM7Q96QT4 1865 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A10PA6NDY2 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A18PA6NE21 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A16PA6NEW6 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A20PA6NIJ5 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A8PA6NJQ4 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A7PA6NKC0 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A22PA8MWA6 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A12PA8MX19 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A5PA8MXJ8 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A23PA8MXZ1 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 RPL36A-HNRNPH2H7BZ11 118 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 ACTL6AO96019 429 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 HBZP02008 142 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A15PP0C7V4 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A13PP0C7W8 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A14PP0C7W9 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A24PP0C7X0 464 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 TNFAIP6P98066 277 aaPredicted RBP6.72□□□□□ -1.33
SF3B3-201ENST00000302516 ADAMTS17Q8TE56 1095 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 MYEOVQ96EZ4 313 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 C1RLQ9NZP8 487 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 DMRT1Q9Y5R6 373 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 M0R296 226 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 GZMHP20718 246 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 B2MP61769 119 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 CCL7P80098 99 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 MEF2BQ02080 365 aaPredicted RBP6.72□□□□□ -1.33
SF3B3-201ENST00000302516 OR4A47Q6IF82 309 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 WFIKKN1Q96NZ8 548 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 NRIP2Q9BQI9 281 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 LPAR5Q9H1C0 372 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 METTL1Q9UBP6 276 aaKnown RBP6.72□□□□□ -1.33
SF3B3-201ENST00000302516 SRSF9Q13242 221 aaKnown RBP eCLIP6.72□□□□□ -1.33
SF3B3-201ENST00000302516 PSG5Q15238 335 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 SPNS3Q6ZMD2 512 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 MRPL30Q8TCC3 161 aaKnown RBP6.72□□□□□ -1.33
SF3B3-201ENST00000302516 RSG1Q9BU20 258 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 OR2H1Q9GZK4 316 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 RAB1BQ9H0U4 201 aa6.72□□□□□ -1.33
SF3B3-201ENST00000302516 FAM90A26D6RGX4 464 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 CCR2P41597 374 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 BRWD1Q9NSI6 2320 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 NRXN2Q9P2S2 1712 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 AMY1AP04745 511 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 IER3P46695 156 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 CEBPDP49716 269 aaPredicted RBP6.71□□□□□ -1.33
SF3B3-201ENST00000302516 CYB561D1Q8N8Q1 229 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 DEFB108BQ8NET1 73 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 ASB5Q8WWX0 329 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 ADAT3Q96EY9 351 aaPredicted RBP6.71□□□□□ -1.33
SF3B3-201ENST00000302516 RAB33BQ9H082 229 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 SRD5A3Q9H8P0 318 aa6.71□□□□□ -1.33
SF3B3-201ENST00000302516 CISD1Q9NZ45 108 aaKnown RBP6.71□□□□□ -1.33
SF3B3-201ENST00000302516 PTPRDP23468 1912 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 METTL12A8MUP2 240 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 MELTFP08582 738 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 FCARP24071 287 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 CD82P27701 267 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 SPRY3O43610 288 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 IZUMO4Q1ZYL8 232 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 OR8G5Q8NG78 346 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 OR5A2Q8NGI9 324 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 AQP10Q96PS8 301 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 PLAC1Q9HBJ0 212 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 ST6GALNAC2Q9UJ37 374 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 ACAA2P42765 397 aaKnown RBP6.71□□□□□ -1.34
SF3B3-201ENST00000302516 TUSC1Q2TAM9 212 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 THSD7AQ9UPZ6 1657 aa6.71□□□□□ -1.34
SF3B3-201ENST00000302516 DHRS7CA6NNS2 312 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms