RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 MRGPRGQ86SM5 289 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 DTX1Q86Y01 620 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR2T6Q8NHC8 308 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 PRSS3P2Q8NHM4 247 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 GNB4Q9HAV0 340 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 A0A087WV48 116 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 IGKV1-8A0A0C4DH67 115 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 RPLP1P05386 114 aaKnown RBP10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 VMA21Q3ZAQ7 101 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 NRIP2Q9BQI9 281 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 PECRQ9BY49 303 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 IL17BQ9UHF5 180 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 ZNF106Q9H2Y7 1883 aaKnown RBP10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 K7ENP7 123 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 NKX2-8O15522 239 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 DYNLT3P51808 116 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 Q1RN00 199 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 VWA1Q6PCB0 445 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 INO80CQ6PI98 192 aaPredicted RBP10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 C17orf78Q8N4C9 275 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 FRRS1LQ9P0K9 344 aa10.39□□□□□ -0.75
SYNGAP1-201ENST00000293748 LANCL1O43813 399 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 FGF2P09038 288 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 HTR1DP28221 377 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 CEACAM6P40199 344 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 NPEPL1Q8NDH3 523 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 TMEM167BQ9NRX6 74 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 LRRC3CA6NJW4 275 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 ERVH48-1M5A8F1 160 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 PLPP3O14495 311 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 HEXAP06865 529 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 SCGB1C2P0DMR2 95 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 GZMMP51124 257 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 HLA-DRB5Q30154 266 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR5AU1Q8NGC0 362 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 MOGAT1Q96PD6 335 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 AAMDCQ9H7C9 122 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 SLC2A8Q9NY64 477 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 PCDHGA9Q9Y5G4 932 aaKnown RBP10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 SPINK4O60575 86 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 ACAA1P09110 424 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 SH2D2AQ9NP31 389 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 PROCRQ9UNN8 238 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 CD1AP06126 327 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 BMP5P22003 454 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 FGF8P55075 233 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 KHDC3LQ587J8 217 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 TMEM97Q5BJF2 176 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR4D11Q8NGI4 311 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 MCHR2Q969V1 340 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 C10orf35Q96D05 121 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 MEGF10Q96KG7 1140 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 ZNF552Q9H707 407 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 SLC2A9Q9NRM0 540 aa10.38□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR2W5A6NFC9 320 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 RPS4Y1P22090 263 aaKnown RBP10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 ACSM6Q6P461 480 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 CHAC2Q8WUX2 184 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 STARD4Q96DR4 205 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 RNF2Q99496 336 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 WDR13Q9H1Z4 485 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 FOXS1O43638 330 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 IL2RAP01589 272 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 FAM87AP0C7U9 286 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 HIST3H3Q16695 136 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 PTX4Q96A99 478 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 POM121Q96HA1 1249 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 MYLKQ15746 1914 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 AHCTF1Q8WYP5 2266 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR5B21A6NL26 309 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 C11orf94C9JXX5 98 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 SLC25A5P05141 298 aaKnown RBP10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 DCAF10Q5QP82 559 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 DPPA3Q6W0C5 159 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 ICAM5Q9UMF0 924 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 STARD10Q9Y365 291 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 TPRP12270 2363 aaKnown RBP10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 PRUNE2Q8WUY3 3088 aa10.37□□□□□ -0.75
SYNGAP1-201ENST00000293748 LRP4O75096 1905 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 H3BMH7 237 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 DHRS11Q6UWP2 260 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 OR2M7Q8NG81 312 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 SLC52A3Q9NQ40 469 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 CA10Q9NS85 328 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 ACACAQ13085 2346 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 CHST1O43916 411 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 FCGR3BO75015 233 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 SNCGO76070 127 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 GAPDHP04406 335 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 PGA4P0DJD7 388 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 PGA5P0DJD9 388 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 CXCL2P19875 107 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 KIR2DS2P43631 304 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 RAB7AP51149 207 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 EWSR1Q01844 656 aaKnown RBP eCLIP10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 PDCD1Q15116 288 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 C10orf111Q8N326 155 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 DEFB127Q9H1M4 99 aa10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 MRPS18BQ9Y676 258 aaKnown RBP10.36□□□□□ -0.75
SYNGAP1-201ENST00000293748 DNAJC13O75165 2243 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms