RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 METTL9Q9H1A3 318 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 SLC2A9Q9NRM0 540 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 SDHAF3Q9NRP4 125 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 LYRM2Q9NU23 88 aaPredicted RBP8.88□□□□□ -0.99
UPF3B-201ENST00000276201 DKKL1Q9UK85 242 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 LOC102723971A0A1B0GUV8 181 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 TRDCB7Z8K6 153 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 TMEM225BP0DP42 221 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 SSR4P51571 173 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 ERVFRD-1P60508 538 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 HLA-DRB3P79483 266 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 NHLH2Q02577 135 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 FOXO1Q12778 655 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 ZNF766Q5HY98 468 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 COA6Q5JTJ3 125 aaKnown RBP8.88□□□□□ -0.99
UPF3B-201ENST00000276201 GALNTL5Q7Z4T8 443 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 C6orf201Q7Z4U5 140 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 BEND2Q8NDZ0 799 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 OR52M1Q8NGK5 317 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 RASL10BQ96S79 203 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 LRFN1Q9P244 771 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 PITPNC1Q9UKF7 332 aa8.88□□□□□ -0.99
UPF3B-201ENST00000276201 PIGBOS1A0A0B4J2F0 54 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 SOD3P08294 240 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 FCGR2AP12318 317 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 UCP1P25874 307 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 CYB561P49447 251 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 CCL20P78556 96 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 TLE4Q04727 773 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 MYBPHQ13203 477 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 PLPPR5Q32ZL2 321 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 C1orf87Q8N0U7 546 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 GJC3Q8NFK1 279 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 RAB24Q969Q5 203 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 TAAR6Q96RI8 345 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 EMC6Q9BV81 110 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 CDH20Q9HBT6 801 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 AK3Q9UIJ7 227 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 FOXD3Q9UJU5 478 aaPredicted RBP8.87□□□□□ -0.99
UPF3B-201ENST00000276201 MMP24Q9Y5R2 645 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 WSB1Q9Y6I7 421 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 NCOA6Q14686 2063 aaPredicted RBP8.87□□□□□ -0.99
UPF3B-201ENST00000276201 MYO18BQ8IUG5 2567 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 IGSF23A1L1A6 192 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 RER1O15258 196 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 XRCC2O43543 280 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 EFNA2O43921 213 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 DIRAS3O95661 229 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 SPCS3P61009 180 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 POC1BQ8TC44 478 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 CYYR1Q96J86 154 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 P2RX4Q99571 388 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 ACTR3CQ9C0K3 210 aaPredicted RBP8.87□□□□□ -0.99
UPF3B-201ENST00000276201 ZNF286AQ9HBT8 521 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 CISD1Q9NZ45 108 aaKnown RBP8.87□□□□□ -0.99
UPF3B-201ENST00000276201 MYO7BQ6PIF6 2116 aa8.87□□□□□ -0.99
UPF3B-201ENST00000276201 UBR5O95071 2799 aaPredicted RBP8.87□□□□□ -0.99
UPF3B-201ENST00000276201 TENM4Q6N022 2769 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 CYB5R3P00387 301 aaPredicted RBP8.86□□□□□ -0.99
UPF3B-201ENST00000276201 SP1P08047 785 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 SELLP14151 372 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 CD46P15529 392 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 PMP22Q01453 160 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 IL24Q13007 206 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 JOSD1Q15040 202 aaPredicted RBP8.86□□□□□ -0.99
UPF3B-201ENST00000276201 TAF9Q16594 264 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 HAGHQ16775 308 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 TMEM211Q6ICI0 200 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 LILRB2Q8N423 598 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 OR10AD1Q8NGE0 317 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 ABHD5Q8WTS1 349 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 IL22RA2Q969J5 263 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 TMEM54Q969K7 222 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 FAM210BQ96KR6 192 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 TMEM222Q9H0R3 208 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 RP1L1Q8IWN7 2480 aaPredicted RBP8.86□□□□□ -0.99
UPF3B-201ENST00000276201 A0A1B0GU03 582 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 AQP7P3A6NL99 342 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 ZNF850A8MQ14 1090 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 ZNF727A8MUV8 499 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 E9PLN8 166 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 CLDN34H7C241 214 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 OPN1MWP04001 364 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 QDPRP09417 244 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 WNT2P09544 360 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 OPN1MW2P0DN77 364 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 OPN1MW3P0DN78 364 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 MSR1P21757 451 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 ANOS1P23352 680 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 NKX2-1P43699 371 aaPredicted RBP8.86□□□□□ -0.99
UPF3B-201ENST00000276201 ZNF41P51814 821 aaPredicted RBP8.86□□□□□ -0.99
UPF3B-201ENST00000276201 H3F3AP84243 136 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 GAMTQ14353 236 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 RNPS1Q15287 305 aaKnown RBP8.86□□□□□ -0.99
UPF3B-201ENST00000276201 OR2T2Q6IF00 324 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 CDPF1Q6NVV7 123 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 FAM180AQ6UWF9 173 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 CLEC9AQ6UXN8 241 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 ZNF100Q8IYN0 542 aa8.86□□□□□ -0.99
UPF3B-201ENST00000276201 H1FOOQ8IZA3 346 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms