RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 SPANXN5Q5MJ07 72 aa11.31□□□□□ -0.6
SLC47A1-201ENST00000270570 MRPL14Q6P1L8 145 aaKnown RBP11.31□□□□□ -0.6
SLC47A1-201ENST00000270570 IL22RA1Q8N6P7 574 aa11.31□□□□□ -0.6
SLC47A1-201ENST00000270570 PRDM6Q9NQX0 595 aa11.31□□□□□ -0.6
SLC47A1-201ENST00000270570 SPTA1P02549 2419 aa11.31□□□□□ -0.6
SLC47A1-201ENST00000270570 CHD3Q12873 2000 aaKnown RBP11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 A0A0G2JRQ6 117 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 ZNF729A6NN14 1252 aaPredicted RBP11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 C10orf142B7Z368 130 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 CXCL1P09341 107 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 PSG2P11465 335 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 RAC3P60763 192 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 GAMTQ14353 236 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 C10orf128Q5T292 105 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 OR2T2Q6IF00 324 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 DNASE2BQ8WZ79 361 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 PSMF1Q92530 271 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 MOB3AQ96BX8 217 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 LURAP1Q96LR2 239 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 DUSP23Q9BVJ7 150 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 VSIRQ9H7M9 311 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 FOXD3Q9UJU5 478 aaPredicted RBP11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 LY6G6EA0A0G2JKS1 128 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 TRGC2P03986 189 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 CRYGSP22914 178 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 KCNMB1Q16558 191 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 C20orf204Q6ZNR8 217 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 ZNF808Q8N4W9 903 aaPredicted RBP11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 SAP25Q8TEE9 199 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 GFOD1Q9NXC2 390 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 OR1A1Q9P1Q5 309 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 LRFN1Q9P244 771 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 U3KQA8 63 aa11.3□□□□□ -0.6
SLC47A1-201ENST00000270570 CA6P23280 308 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 ZNF266Q14584 549 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 GPR35Q9HC97 309 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 IFNA17P01571 189 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 CEBPDP49716 269 aaPredicted RBP11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 TRIM61Q5EBN2 209 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 WDR25Q64LD2 544 aaPredicted RBP11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 C14orf144Q96I85 54 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 THOC3Q96J01 351 aaKnown RBP11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 C18orf12Q96KH6 178 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 NIPSNAP3BQ9BS92 247 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 GPR61Q9BZJ8 451 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 TMED3Q9Y3Q3 217 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 POMT1Q9Y6A1 747 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 ZNF318Q5VUA4 2279 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 hCG_38984A0A1B0GV85 526 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 BTBD17A6NE02 478 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 CEBPZOSA8MTT3 80 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 RHBDL1O75783 438 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 OTX1P32242 354 aaPredicted RBP11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 RTL6Q6ICC9 239 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 SPNS3Q6ZMD2 512 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 MKXQ8IYA7 352 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 OR2V1Q8NHB1 315 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 ANGPTL4Q9BY76 406 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 TMEM222Q9H0R3 208 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 CACNG5Q9UF02 275 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 BDP1A6H8Y1 2624 aa11.29□□□□□ -0.6
SLC47A1-201ENST00000270570 ZNF503-AS2A6NEH8 195 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 SLC22A20A6NK97 555 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 TRDCB7Z8K6 153 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 SLC34A2O95436 690 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 FABP4P15090 132 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 MLF1P58340 268 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 ERVFRD-1P60508 538 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 HERPUD1Q15011 391 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 HIKESHIQ53FT3 197 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 Q8WTZ3 238 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 IMMP1LQ96LU5 166 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 MTCH1Q9NZJ7 389 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 WASF3Q9UPY6 502 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 LOC102725191A0A1B0GVB3 256 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 PHOX2AO14813 284 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 HEXAP06865 529 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 SNRPCP09234 159 aaKnown RBP11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 DTYMKP23919 212 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 ECI1P42126 302 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 SSTP61278 116 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 RAB1AP62820 205 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 PLGLB1Q02325 96 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 IL13RA2Q14627 380 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 ZNF239Q16600 458 aaKnown RBP11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 ZNF100Q8IYN0 542 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 RPUSD4Q96CM3 377 aaKnown RBP11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 GINS3Q9BRX5 216 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 FAM234AQ9H0X4 552 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 PLEKHF2Q9H8W4 249 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 DOK5Q9P104 306 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 ARFGEF3Q5TH69 2177 aa11.28□□□□□ -0.6
SLC47A1-201ENST00000270570 A0A087X0M5 115 aa11.27□□□□□ -0.6
SLC47A1-201ENST00000270570 A0A1B0GX30 115 aa11.27□□□□□ -0.6
SLC47A1-201ENST00000270570 OR6C6A6NF89 314 aa11.27□□□□□ -0.6
SLC47A1-201ENST00000270570 IFNA5P01569 189 aa11.27□□□□□ -0.6
SLC47A1-201ENST00000270570 GRPP07492 148 aa11.27□□□□□ -0.6
SLC47A1-201ENST00000270570 CYB561P49447 251 aa11.27□□□□□ -0.6
SLC47A1-201ENST00000270570 RHEBQ15382 184 aa11.27□□□□□ -0.6
SLC47A1-201ENST00000270570 TGIF2LXQ8IUE1 241 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms