RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 MTCH2Q9Y6C9 303 aa14.9□□□□□ -0.02
SRF-201ENST00000265354 A8MXE2 369 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 SCTP09683 121 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 GLB1P16278 677 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 BSXQ3C1V8 233 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 CIB3Q96Q77 187 aaPredicted RBP14.89□□□□□ -0.03
SRF-201ENST00000265354 C5orf42Q9H799 3197 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 TANC1Q9C0D5 1861 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 RNF212BA8MTL3 300 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 FGF16O43320 207 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 LAMTOR5O43504 91 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 GAPDHP04406 335 aaKnown RBP14.89□□□□□ -0.03
SRF-201ENST00000265354 FLVCR1-AS1Q8TAF5 88 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 NTNG2Q96CW9 530 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 SMIM8Q96KF7 97 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 DNAJC4Q9NNZ3 241 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 B4GALT7Q9UBV7 327 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 ZSWIM8A7E2V4 1837 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 HELZP42694 1942 aaKnown RBP14.89□□□□□ -0.03
SRF-201ENST00000265354 A6NCN8 305 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 HIST1H3AP68431 136 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 TMEM183BQ1AE95 376 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 VN1R17PQ8TDU5 208 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 ARL2-SNX15V9GYD0 113 aa14.89□□□□□ -0.03
SRF-201ENST00000265354 TRPM7Q96QT4 1865 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 TOX4O94842 621 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 CCR5P51681 352 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 COL5A1-AS1Q5SY13 56 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 GUSBP11Q6P575 273 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 C5orf24Q7Z6I8 188 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 NOL4LQ96MY1 436 aaPredicted RBP14.88□□□□□ -0.03
SRF-201ENST00000265354 CHST5Q9GZS9 411 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 A0A0A6YYD4 124 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 VDAC1P21796 283 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 FAM3BP58499 235 aaPredicted RBP14.88□□□□□ -0.03
SRF-201ENST00000265354 RPS23P62266 143 aaKnown RBP14.88□□□□□ -0.03
SRF-201ENST00000265354 H2BFWTQ7Z2G1 175 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 OR10A7Q8NGE5 316 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 VWCEQ96DN2 955 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 HIPK2Q9H2X6 1198 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 FBLL1A6NHQ2 334 aaKnown RBP14.88□□□□□ -0.03
SRF-201ENST00000265354 C2CD4DB7Z1M9 353 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 M0QZK8 103 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 GGCTO75223 188 aaKnown RBP14.88□□□□□ -0.03
SRF-201ENST00000265354 PIAS2O75928 621 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 CYB5R3P00387 301 aaPredicted RBP14.88□□□□□ -0.03
SRF-201ENST00000265354 IGFBP3P17936 291 aaPredicted RBP14.88□□□□□ -0.03
SRF-201ENST00000265354 PAX5Q02548 391 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 OR10AD1Q8NGE0 317 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 IFI44Q8TCB0 444 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 SMOC1Q9H4F8 434 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 PRSS50Q9UI38 385 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 TRAPPC1Q9Y5R8 145 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 BPTFQ12830 3046 aa14.88□□□□□ -0.03
SRF-201ENST00000265354 A0A1W2PQD3 144 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 PGA3P0DJD8 388 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 EGR1P18146 543 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 SUPT4H1P63272 117 aaKnown RBP14.87□□□□□ -0.03
SRF-201ENST00000265354 LEMD1Q68G75 181 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 DUSP13Q9UII6 198 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 LRP5LA4QPB2 252 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 HOXC4P09017 264 aaPredicted RBP14.87□□□□□ -0.03
SRF-201ENST00000265354 ERVK-16P61578 105 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 PRR27Q6MZM9 219 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 GTF3AQ92664 365 aaKnown RBP14.87□□□□□ -0.03
SRF-201ENST00000265354 PCNX1Q96RV3 2341 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 LOC390937A0A1W2PQ73 354 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 SLC25A6P12236 298 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 CXCL12P48061 93 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 C5orf63A6NC05 138 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 CRYM-AS1A6NIL9 109 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 CA6P23280 308 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 ERASQ7Z444 233 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 STARD10Q9Y365 291 aa14.87□□□□□ -0.03
SRF-201ENST00000265354 FAM157CP0CG43 387 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 KHDC3LQ587J8 217 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 FFAR4Q5NUL3 377 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 OIT3Q8WWZ8 545 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 ATP5SQ99766 215 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 MYOZ1Q9NP98 299 aaPredicted RBP14.86□□□□□ -0.03
SRF-201ENST00000265354 DBX1A6NMT0 343 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 NPBWR2P48146 333 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 SLC38A11Q08AI6 406 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 CATR1Q13166 79 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 ARSJQ5FYB0 599 aaPredicted RBP14.86□□□□□ -0.03
SRF-201ENST00000265354 BTNL8Q6UX41 500 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 ZDHHC23Q8IYP9 409 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 AGBL5Q8NDL9 886 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 OR10V1Q8NGI7 309 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 CLDN23Q96B33 292 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 BET1LQ9NYM9 111 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 IGHV3-43A0A0B4J1X8 118 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 ACTL6BO94805 426 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 IGHV3-43DP0DP04 118 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 CCL3P10147 92 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 PSG2P11465 335 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 C14orf144Q96I85 54 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 PCGF1Q9BSM1 259 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 KIAA1456Q9P272 454 aa14.86□□□□□ -0.03
SRF-201ENST00000265354 C5orf52A6NGY3 159 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms