RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 NKAPLQ5M9Q1 402 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 OLFML2AQ68BL7 652 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 MOB1BQ7L9L4 216 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 TPRX1Q8N7U7 411 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 OR13A1Q8NGR1 328 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 ZNF714Q96N38 554 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 TBX15Q96SF7 602 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 METTL8Q9H825 291 aaKnown RBP11.71□□□□□ -0.53
SSBP1-201ENST00000265304 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 C12orf4Q9NQ89 552 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 MGAT4AQ9UM21 535 aa11.71□□□□□ -0.53
SSBP1-201ENST00000265304 TRAV18A0A075B6X5 111 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 A8MV72 311 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-201ENST00000265304 F2RL2O00254 374 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 GNB3P16520 340 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 CD34P28906 385 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 ETV6P41212 452 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 EDDM3AQ14507 147 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 TMEM30BQ3MIR4 351 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 LY6G6FQ5SQ64 297 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 OR52M1Q8NGK5 317 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 PHF21AQ96BD5 680 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 SMR3AQ99954 134 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 CMSS1Q9BQ75 279 aaKnown RBP11.7□□□□□ -0.54
SSBP1-201ENST00000265304 OCSTAMPQ9BR26 566 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 DCUN1D5Q9BTE7 237 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 C7orf69Q9H7B7 122 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 Q9N2K0 584 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 ANAPC10Q9UM13 185 aa11.7□□□□□ -0.54
SSBP1-201ENST00000265304 hCG_1809904A0A1W2PP81 198 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 A0A1W2PPE2 198 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 A0A1W2PQ09 198 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 A0A1W2PR64 198 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 A0A1W2PRV1 198 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 SSX5O60225 188 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 RCC1P18754 421 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-201ENST00000265304 TNFSF8P32971 234 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 TAS2R20P59543 309 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 ARF6P62330 175 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 HMGN3Q15651 99 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 Q3ZCU0 254 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 C6orf183Q5T699 404 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 CLEC9AQ6UXN8 241 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 BAIAP2L2Q6UXY1 529 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 LAX1Q8IWV1 398 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 FAM185AQ8N0U4 392 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 NEK7Q8TDX7 302 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 C15orf40Q8WUR7 153 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 GAL3ST2Q9H3Q3 398 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 KCNS2Q9ULS6 477 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 AUP1Q9Y679 476 aa11.69□□□□□ -0.54
SSBP1-201ENST00000265304 C12orf77C9JDV5 145 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 SULT1C2O00338 296 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 CTDSPLO15194 276 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 CD3GP09693 182 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 IGHV1-8P0DP01 117 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 CCL3L1P16619 93 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 NAT1P18440 290 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 PTBP1P26599 531 aaKnown RBP eCLIP11.68□□□□□ -0.546e-6■■□□□ 11.7
SSBP1-201ENST00000265304 LOXL3P58215 753 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 BPIFB3P59826 476 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 HTD2P86397 168 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 CNPY1Q3B7I2 92 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 TMEM69Q5SWH9 247 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 METTL11BQ5VVY1 283 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 HCP5Q6MZN7 132 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 FAHD2BQ6P2I3 314 aaPredicted RBP11.68□□□□□ -0.54
SSBP1-201ENST00000265304 CNIH2Q6PI25 160 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 CCDC190Q86UF4 302 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 C8orf31Q8N9H6 132 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 OR6Q1Q8NGQ2 317 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 OR4K15Q8NH41 348 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 GPX8Q8TED1 209 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 FAHD2AQ96GK7 314 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 ABHD1Q96SE0 405 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 HDHD3Q9BSH5 251 aaPredicted RBP11.68□□□□□ -0.54
SSBP1-201ENST00000265304 TOLLIPQ9H0E2 274 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 ZMAT3Q9HA38 289 aaKnown RBP11.68□□□□□ -0.54
SSBP1-201ENST00000265304 SCPEP1Q9HB40 452 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 RAB9BQ9NP90 201 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 CALYQ9NYX4 217 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 ELF5Q9UKW6 265 aaPredicted RBP11.68□□□□□ -0.54
SSBP1-201ENST00000265304 JMJD1CQ15652 2540 aa11.68□□□□□ -0.54
SSBP1-201ENST00000265304 TMEM235A6NFC5 223 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 TOX4O94842 621 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 FCGR3AP08637 254 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 ERVFRD-1P60508 538 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 KLF17Q5JT82 389 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-201ENST00000265304 STEAP3Q658P3 488 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 OR52W1Q6IF63 320 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 OR11H6Q8NGC7 330 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 ZNF596Q8TC21 504 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 MRGPRDQ8TDS7 321 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 KIRREL1Q96J84 757 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 C6orf62Q9GZU0 229 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-201ENST00000265304 TAF9BQ9HBM6 251 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 TRAPPC2LQ9UL33 140 aa11.67□□□□□ -0.54
SSBP1-201ENST00000265304 CENPVL3A0A0U1RRI6 287 aa11.66□□□□□ -0.54
SSBP1-201ENST00000265304 RGS5O15539 181 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms