RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 ZNF708P17019 499 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 SLC6A8P48029 635 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 CNN1P51911 297 aaKnown RBP12.33□□□□□ -0.44
SCARF1-201ENST00000263071 YPEL5P62699 121 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 ANKRD55Q3KP44 614 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 OR2G3Q8NGZ4 309 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 TMEM234Q8WY98 164 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 MRGPRFQ96AM1 343 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 TMEM56Q96MV1 263 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 ZNF319Q9P2F9 582 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 AK3Q9UIJ7 227 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 NXT1Q9UKK6 140 aaKnown RBP12.33□□□□□ -0.44
SCARF1-201ENST00000263071 TMEM56-RWDD3S4R434 201 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 H3BMH7 237 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 RAD51DO75771 328 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 CD1AP06126 327 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 PSG1P11464 419 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 PNRC1Q12796 327 aaPredicted RBP12.33□□□□□ -0.44
SCARF1-201ENST00000263071 ADIRFQ15847 76 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 EMC4Q5J8M3 183 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 ABHD14AQ9BUJ0 271 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 G6PC2Q9NQR9 355 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 FGF21Q9NSA1 209 aa12.33□□□□□ -0.44
SCARF1-201ENST00000263071 DDAH2O95865 285 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 CCNOP22674 350 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 APOBEC1P41238 236 aaKnown RBP12.32□□□□□ -0.44
SCARF1-201ENST00000263071 SUMO1P63165 101 aaKnown RBP12.32□□□□□ -0.44
SCARF1-201ENST00000263071 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 TMEM170AQ8WVE7 144 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 ZNF407Q9C0G0 2248 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 GPR179Q6PRD1 2367 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 A0A1B0GV72 72 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 A0A1B0GW64 132 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 NUDT21O43809 227 aaKnown RBP12.32□□□□□ -0.44
SCARF1-201ENST00000263071 HSPB1P04792 205 aaKnown RBP12.32□□□□□ -0.44
SCARF1-201ENST00000263071 DBHP09172 617 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 CTSSP25774 331 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 SNAI3Q3KNW1 292 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 PLAC9Q5JTB6 97 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 OR4A47Q6IF82 309 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 H1FNTQ75WM6 255 aaPredicted RBP12.32□□□□□ -0.44
SCARF1-201ENST00000263071 OR2AE1Q8NHA4 323 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 ZNF721Q8TF20 911 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 BTF3L4Q96K17 158 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 C5orf66Q9H5L9 145 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 TMEM106BQ9NUM4 274 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 PLEKHJ1Q9NW61 149 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 CACNA1DQ01668 2161 aa12.32□□□□□ -0.44
SCARF1-201ENST00000263071 CACNA1GO43497 2377 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 A0A1B0GU03 582 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 SPRY1O43609 319 aaPredicted RBP12.31□□□□□ -0.44
SCARF1-201ENST00000263071 SAMD13Q5VXD3 122 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 POC1AQ8NBT0 407 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 FNDC9Q8TBE3 224 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 UQCR10Q9UDW1 63 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 ST3GAL6Q9Y274 331 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 WIPI2Q9Y4P8 454 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 GNG7O60262 68 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 APOBEC3AP31941 199 aaPredicted RBP12.31□□□□□ -0.44
SCARF1-201ENST00000263071 P2RY1P47900 373 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 OR6C1Q96RD1 312 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 ZNF581Q9P0T4 197 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 MAP1LC3B2A6NCE7 125 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 MS4A18H0YCH9 400 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 H7BYZ3 331 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 CLPSP04118 112 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 ZNF43P17038 809 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 FAM3BP58499 235 aaPredicted RBP12.31□□□□□ -0.44
SCARF1-201ENST00000263071 MS4A18Q3C1V0 323 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 KIAA0895LQ68EN5 471 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 UEVLDQ8IX04 471 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 OR4D5Q8NGN0 318 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 MAP1LC3BQ9GZQ8 125 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 TMEM242Q9NWH2 141 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 CLN8Q9UBY8 286 aa12.31□□□□□ -0.44
SCARF1-201ENST00000263071 FRG2CA6NGY1 282 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 GDF9O60383 454 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 IGHV3-9P01782 118 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 ABCA11PQ4W5N1 156 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 C9orf135Q5VTT2 229 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 TMEM156Q8N614 296 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 KCNE4Q8WWG9 221 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 PDLIM4P50479 330 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 CLDN17P56750 224 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 MYBPHQ13203 477 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 TMEM256Q8N2U0 113 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 ZNF160Q9HCG1 818 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 OBP2AQ9NY56 170 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 A0A1W2PNV4 684 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 CSRP1P21291 193 aaKnown RBP12.3□□□□□ -0.44
SCARF1-201ENST00000263071 ARF6P62330 175 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 ICAM4Q14773 271 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 SPIN3Q5JUX0 258 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 NIT1Q86X76 327 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 OR8B12Q8NGG6 310 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 CMTM2Q8TAZ6 248 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 ZNF519Q8TB69 540 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 CTDSP1Q9GZU7 261 aa12.3□□□□□ -0.44
SCARF1-201ENST00000263071 FSCN3Q9NQT6 498 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms