RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 PACRGLQ8N7B6 248 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SUMF2Q8NBJ7 301 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 OR6N1Q8NGY5 312 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 OR5J2Q8NH18 312 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 Q8WTZ3 238 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ORAOV1Q8WV07 137 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 S100ZQ8WXG8 99 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 NDRG1Q92597 394 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 RBPMSQ93062 196 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 RPUSD4Q96CM3 377 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 IMP4Q96G21 291 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 MRAP2Q96G30 205 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SMARCD1Q96GM5 515 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 BTF3L4Q96K17 158 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SCGB3A2Q96PL1 93 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 OR7D2Q96RA2 312 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 RASL11BQ9BPW5 248 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 CHST5Q9GZS9 411 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 RPF2Q9H7B2 306 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 CACYBPQ9HB71 228 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 LRTM1Q9HBL6 345 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SPANXCQ9NY87 97 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 C14orf166Q9Y224 244 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 TP53TG1Q9Y2A0 90 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 YLPM1P49750 1951 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 BRCA1P38398 1863 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 PRDM15P57071 1507 aaPredicted RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 MED14O60244 1454 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 CASZ1Q86V15 1759 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 DAPK1P53355 1430 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 IGHV2OR16-5A0A0B4J2B6 119 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 NKX2-6A6NCS4 301 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 CLDN24A6NM45 220 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 H7C417 338 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 M0R1B8 84 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 DNASE2O00115 360 aaPredicted RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 NME4O00746 187 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 GYG2O15488 501 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ICOSLGO75144 302 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 FOXH1O75593 365 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 GADD45GO95257 159 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 CSF3P09919 207 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF30P17039 623 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 MDKP21741 143 aaPredicted RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 COX7A1P24310 79 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SULT1A1P50225 295 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SULT1A2P50226 295 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 AQP5P55064 265 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 DLX1P56177 255 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SLC25A11Q02978 314 aaKnown RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 EDDM3AQ14507 147 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 QPRTQ15274 297 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 RSU1Q15404 277 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 OR1Q1Q15612 314 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 OR7A5Q15622 319 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF726P1Q15940 193 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SLC25A35Q3KQZ1 300 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 OCIAD2Q56VL3 154 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 TMEM97Q5BJF2 176 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 CLLU1Q5K131 121 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 AVPI1Q5T686 147 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 TEX261Q6UWH6 196 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 TMPPEQ6ZT21 453 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 CROCCP2Q86T23 111 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 LINC01551Q86U37 167 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 DOLPP1Q86YN1 238 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 BAP18Q8IXM2 172 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 PDZD9Q8IXQ8 264 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 LRRC25Q8N386 305 aaPredicted RBP2.93□□□□□ -1.94
CCDC54-201ENST00000261058 OR2Z1Q8NG97 314 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 OR4K17Q8NGC6 315 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 OR52E4Q8NGH9 312 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ZFAND1Q8TCF1 268 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SEH1LQ96EE3 360 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF414Q96IQ9 312 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF488Q96MN9 340 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 COL21A1Q96P44 957 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 DOK1Q99704 481 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SIGMAR1Q99720 223 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 PECRQ9BY49 303 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SLC25A22Q9H936 323 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 EFCAB1Q9HAE3 211 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SNX12Q9UMY4 172 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 SIGLEC9Q9Y336 463 aa2.93□□□□□ -1.94
CCDC54-201ENST00000261058 MAP3K1Q13233 1512 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 LMTK2Q8IWU2 1503 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 SCN2AQ99250 2005 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 POLA1P09884 1462 aaPredicted RBP2.92□□□□□ -1.94
CCDC54-201ENST00000261058 FYCO1Q9BQS8 1478 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 NLRP1Q9C000 1473 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 ARHGAP21Q5T5U3 1957 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 SPATA31E1Q6ZUB1 1445 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 PCM1Q15154 2024 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 IGLV3-22A0A075B6J6 115 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 A0A096LPI6 279 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 TINCRA0A1B0GVN0 87 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 TRAPPC13A5PLN9 417 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 A8MWP6 167 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 K7EMT4 169 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 MANBAO00462 879 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms