RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 HIST1H2BJP06899 126 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 HIST1H2BOP23527 126 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 HIST1H2BBP33778 126 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 HIST1H2BDP58876 126 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 HIST1H2BCP62807 126 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 HIST2H2BEQ16778 126 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 KIAA1644Q3SXP7 199 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.94□□□□□ -0.34
KCTD3-201ENST00000259154 GPBAR1Q8TDU6 330 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 HIST1H2BHQ93079 126 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 HIST1H2BNQ99877 126 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 HIST1H2BMQ99879 126 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 MFRPQ9BY79 579 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 TOX4O94842 621 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 SOD3P08294 240 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 ERVFC1-1P60608 527 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 TMEM164Q5U3C3 297 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 VHLLQ6RSH7 139 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 GPR27Q9NS67 375 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 IGKV1D-8A0A087WSZ0 117 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 UBE2CO00762 179 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 DANCRP0C864 163 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 HOXA5P20719 270 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 TFPI2P48307 235 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 C9orf40Q8IXQ3 194 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 OR1N1Q8NGS0 311 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 TMEM68Q96MH6 324 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 MOB1AQ9H8S9 216 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 IGHV3-43A0A0B4J1X8 118 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 C20orf202A1L168 122 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 ZIC3O60481 467 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 IGHV3-43DP0DP04 118 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 SLC38A11Q08AI6 406 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 CSRP2Q16527 193 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 OR10V1Q8NGI7 309 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 FLVCR1-AS1Q8TAF5 88 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 ZNF596Q8TC21 504 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 TMEM230Q96A57 120 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 DUSP15Q9H1R2 295 aaPredicted RBP12.94□□□□□ -0.34
KCTD3-201ENST00000259154 G6PC2Q9NQR9 355 aa12.94□□□□□ -0.34
KCTD3-201ENST00000259154 PCDH15Q96QU1 1955 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 OR7C2O60412 319 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 WISP1O95388 367 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 RPS4Y1P22090 263 aaKnown RBP12.93□□□□□ -0.34
KCTD3-201ENST00000259154 CMTM2Q8TAZ6 248 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 ZNF524Q96C55 264 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 OXGR1Q96P68 337 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 RTBDNQ9BSG5 229 aaPredicted RBP12.93□□□□□ -0.34
KCTD3-201ENST00000259154 NOSIPQ9Y314 301 aaKnown RBP12.93□□□□□ -0.34
KCTD3-201ENST00000259154 HSBP1L1C9JCN9 74 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 LYPD3O95274 346 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 WNT5AP41221 380 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 H2BFWTQ7Z2G1 175 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 C11orf42Q8N5U0 333 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 OR1L3Q8NH93 324 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 RHBDD1Q8TEB9 315 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 PP6455Q8WZ26 134 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 CYTL1Q9NRR1 136 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 PCNX3Q9H6A9 2034 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 ELOA3CA0A087WX78 387 aaPredicted RBP12.93□□□□□ -0.34
KCTD3-201ENST00000259154 KIR2DS1A0A191URI9 304 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 LMO7DNF2Z398 122 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 SIAH2O43255 324 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 KIR2DS4P43632 304 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 ERVK-16P61578 105 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 KIR2DS1Q14954 304 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 DEGS2Q6QHC5 323 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 SMIM8Q96KF7 97 aa12.93□□□□□ -0.34
KCTD3-201ENST00000259154 ZNF385AQ96PM9 386 aaKnown RBP12.93□□□□□ -0.34
KCTD3-201ENST00000259154 CCNL2Q96S94 520 aaPredicted RBP12.93□□□□□ -0.34
KCTD3-201ENST00000259154 ACTR3CQ9C0K3 210 aaPredicted RBP12.93□□□□□ -0.34
KCTD3-201ENST00000259154 OR10G4Q8NGN3 311 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 OR10G9Q8NGN4 311 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 OR10G7Q8NGN6 311 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 POC1BQ8TC44 478 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 MRPL30Q8TCC3 161 aaKnown RBP12.92□□□□□ -0.34
KCTD3-201ENST00000259154 ST8SIA1Q92185 356 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 KIAA1456Q9P272 454 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 EML5Q05BV3 1969 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 FAM166BA8MTA8 275 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 FGF16O43320 207 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 FUT7Q11130 342 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 C1orf100Q5SVJ3 147 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 HSPB9Q9BQS6 159 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 SCTP09683 121 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 DEFA4P12838 97 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 COX5AP20674 150 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 ERVFRD-1P60508 538 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 RPP30P78346 268 aaKnown RBP12.92□□□□□ -0.34
KCTD3-201ENST00000259154 ISXQ2M1V0 245 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 LINC00696Q6ZRV3 163 aa12.92□□□□□ -0.34
KCTD3-201ENST00000259154 PAQR4Q8N4S7 273 aaPredicted RBP12.92□□□□□ -0.34
KCTD3-201ENST00000259154 PDCD6O75340 191 aa12.91□□□□□ -0.34
KCTD3-201ENST00000259154 DCDP81605 110 aaKnown RBP12.91□□□□□ -0.34
KCTD3-201ENST00000259154 VAX1Q5SQQ9 334 aa12.91□□□□□ -0.34
KCTD3-201ENST00000259154 PRAMEF5Q5TYX0 476 aa12.91□□□□□ -0.34
KCTD3-201ENST00000259154 PRAMEF6Q5VXH4 476 aa12.91□□□□□ -0.34
KCTD3-201ENST00000259154 MRPL54Q6P161 138 aaKnown RBP12.91□□□□□ -0.34
KCTD3-201ENST00000259154 BTNL8Q6UX41 500 aa12.91□□□□□ -0.34
KCTD3-201ENST00000259154 BTNL3Q6UXE8 466 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms