RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 DEFB108AA8MXU0 73 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 CXCL13O43927 109 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 ACAA1P09110 424 aaPredicted RBP4.24□□□□□ -1.73
RC3H1-201ENST00000258349 CTLA4P16410 223 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM50BP56557 158 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 MPV17LQ2QL34 196 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 SARGQ9BW04 601 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 PHF7Q9BWX1 381 aaPredicted RBP4.24□□□□□ -1.73
RC3H1-201ENST00000258349 FRRS1LQ9P0K9 344 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM210A6NLX4 147 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 MKRN2OSH3BPM6 223 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 TNFSF15O95150 251 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 CDS2O95674 445 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF25P17030 456 aaPredicted RBP4.24□□□□□ -1.73
RC3H1-201ENST00000258349 RPS27P42677 84 aaKnown RBP4.24□□□□□ -1.73
RC3H1-201ENST00000258349 NAAAQ02083 359 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 GGTLC2Q14390 218 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 OR4A47Q6IF82 309 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 GFRALQ6UXV0 394 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 C5orf17Q8NAS9 161 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 HMGCLL1Q8TB92 370 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 RNF122Q9H9V4 155 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 PAM16Q9Y3D7 125 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 AGRNO00468 2067 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 TRAV38-1A0A0B4J264 116 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 TCRBV16S1A1N1A0A5B0 115 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 SPINK4O60575 86 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 RHBDL1O75783 438 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 BCL2P10415 239 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 CXCL3P19876 107 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 RAC3P60763 192 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 ISXQ2M1V0 245 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 PABPC1L2AQ5JQF8 200 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 SLC35E4Q6ICL7 350 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 BHLHA15Q7RTS1 189 aaPredicted RBP4.24□□□□□ -1.73
RC3H1-201ENST00000258349 CBLN2Q8IUK8 224 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 C1orf174Q8IYL3 243 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 ZG16BQ96DA0 208 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 FUT9Q9Y231 359 aa4.24□□□□□ -1.73
RC3H1-201ENST00000258349 IGHV3-64DA0A0J9YX35 117 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CDX4O14627 284 aaPredicted RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 GAPDHP04406 335 aaKnown RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 PRSS1P07477 247 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 VDAC1P21796 283 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TCTAP57738 103 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SPINK9Q5DT21 86 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CLEC18BQ6UXF7 455 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SLC16A13Q7RTY0 426 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CXorf67Q86X51 503 aaPredicted RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 OR2D3Q8NGH3 330 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 OR4A4PQ8NGN8 299 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 GABRG3Q99928 467 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 DOK5Q9P104 306 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CDC42EP3Q9UKI2 254 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 IGF2P01344 180 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 NPY1RP25929 384 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 PMELP40967 661 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CAMPP49913 170 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 IRF3Q14653 427 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 DEFB109BQ30KR1 87 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SMUG1Q53HV7 270 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF788Q6ZQV5 615 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 DEFB108BQ8NET1 73 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CCL4L1Q8NHW4 92 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 ORAI1Q96D31 301 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 WDR13Q9H1Z4 485 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SAP30LQ9HAJ7 183 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 NBASA2RRP1 2371 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CXCL10P02778 98 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 ORM2P19652 201 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 PGFP49763 221 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 OR10D3Q8NH80 312 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CHST5Q9GZS9 411 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 OR2W1Q9Y3N9 320 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 OR4C46A6NHA9 309 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF83P51522 516 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SERF2P84101 59 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TNFAIP6P98066 277 aaPredicted RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CD226Q15762 336 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 AMMECR1LQ6DCA0 310 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TP53RKQ96S44 253 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 COL25A1Q9BXS0 654 aaPredicted RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SRD5A3Q9H8P0 318 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 COA4Q9NYJ1 87 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TRBV9A0A0B4J1U6 114 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 M0R3E3 92 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SYNGR2O43760 224 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CD1AP06126 327 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 COL19A1Q14993 1142 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TCTN1Q2MV58 587 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TP53I13Q8NBR0 393 aaPredicted RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 ADAD2Q8NCV1 583 aaKnown RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 OR5M9Q8NGP3 310 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 FZR1Q9UM11 496 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 NOTCH4Q99466 2003 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 A0A1W2PQD3 144 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SIAH2O43255 324 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 PPIHO43447 177 aaKnown RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 COL8A1P27658 744 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms