RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SPIN3Q5JUX0 258 aa15.91■□□□□ 0.14
TRIM47-201ENST00000254816 FIP1L1Q6UN15 594 aaKnown RBP15.91■□□□□ 0.14
TRIM47-201ENST00000254816 CLEC18BQ6UXF7 455 aa15.91■□□□□ 0.14
TRIM47-201ENST00000254816 ESRP2Q9H6T0 727 aaKnown RBP15.91■□□□□ 0.14
TRIM47-201ENST00000254816 TREM2Q9NZC2 230 aa15.91■□□□□ 0.14
TRIM47-201ENST00000254816 ERRFI1Q9UJM3 462 aaPredicted RBP15.91■□□□□ 0.14
TRIM47-201ENST00000254816 DYSFO75923 2080 aa15.9■□□□□ 0.14
TRIM47-201ENST00000254816 KIAA2026Q5HYC2 2103 aa15.9■□□□□ 0.14
TRIM47-201ENST00000254816 SHISA9B4DS77 424 aa15.9■□□□□ 0.14
TRIM47-201ENST00000254816 LGALS8O00214 317 aa15.9■□□□□ 0.14
TRIM47-201ENST00000254816 UBA52P62987 128 aaKnown RBP15.9■□□□□ 0.14
TRIM47-201ENST00000254816 SUPT4H1P63272 117 aaKnown RBP15.9■□□□□ 0.14
TRIM47-201ENST00000254816 PEG10Q86TG7 708 aaKnown RBP15.9■□□□□ 0.14
TRIM47-201ENST00000254816 FAM219AQ8IW50 185 aa15.9■□□□□ 0.14
TRIM47-201ENST00000254816 DMRTC2Q8IXT2 367 aaPredicted RBP15.9■□□□□ 0.14
TRIM47-201ENST00000254816 ZCCHC24Q8N2G6 241 aaKnown RBP15.9■□□□□ 0.14
TRIM47-201ENST00000254816 THAP6Q8TBB0 222 aa15.9■□□□□ 0.14
TRIM47-201ENST00000254816 PFDN2Q9UHV9 154 aa15.9■□□□□ 0.14
TRIM47-201ENST00000254816 METRNQ9UJH8 293 aa15.9■□□□□ 0.14
TRIM47-201ENST00000254816 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.89■□□□□ 0.13
TRIM47-201ENST00000254816 MPTX1A8MV57 137 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 BCL2L11O43521 198 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 PSPNO60542 156 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 OR2F2O95006 317 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 RCC1P18754 421 aaPredicted RBP15.89■□□□□ 0.13
TRIM47-201ENST00000254816 FCGR2CP31995 323 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 OR2F1Q13607 317 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 ZNF345Q14585 488 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 PDZD9Q8IXQ8 264 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 ZNF471Q9BX82 626 aaPredicted RBP15.89■□□□□ 0.13
TRIM47-201ENST00000254816 NDRG3Q9UGV2 375 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 CEACAM18A8MTB9 384 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 SFT2D2O95562 160 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 PGAM2P15259 253 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 FXYD4P59646 89 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 TNFAIP6P98066 277 aaPredicted RBP15.89■□□□□ 0.13
TRIM47-201ENST00000254816 ANKRD55Q3KP44 614 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 ACOT7LQ6ZUV0 252 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 TMEM185AQ8NFB2 350 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 HIVEP3Q5T1R4 2406 aa15.89■□□□□ 0.13
TRIM47-201ENST00000254816 RAI1Q7Z5J4 1906 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-201ENST00000254816 PLAUP00749 431 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 DHRS11Q6UWP2 260 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 GCSAMQ8N6F7 178 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 TOMM40LQ969M1 308 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 KCNJ16Q9NPI9 418 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 IGHV3OR15-7A0A075B7D8 119 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 E7EQL1 145 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-201ENST00000254816 BET1O15155 118 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 GLAP06280 429 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 GNLYP22749 145 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 PSMB6P28072 239 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 HERPUD1Q15011 391 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 NUP50Q9UKX7 468 aa15.88■□□□□ 0.13
TRIM47-201ENST00000254816 KNG1P01042 644 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 SMIM21Q3B7S5 101 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 FAM201AQ5SY85 155 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 INO80EQ8NBZ0 244 aaPredicted RBP15.87■□□□□ 0.13
TRIM47-201ENST00000254816 C17orf50Q8WW18 174 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 DHRS9Q9BPW9 319 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 MED9Q9NWA0 146 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 SRRM5B3KS81 715 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 TRDCB7Z8K6 153 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 SIAH2O43255 324 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 COL10A1Q03692 680 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 Q6ZS49 121 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 TGIF2LYQ8IUE0 185 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 DCUN1D4Q92564 292 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 RIMS4Q9H426 269 aaPredicted RBP15.87■□□□□ 0.13
TRIM47-201ENST00000254816 GCM1Q9NP62 436 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 IL19Q9UHD0 177 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 GLS2Q9UI32 602 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 DSCAMO60469 2012 aa15.87■□□□□ 0.13
TRIM47-201ENST00000254816 IGKV1-6A0A0C4DH72 117 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 CD3EP07766 207 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 ZP3P21754 424 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 AADACP22760 399 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 MDH2P40926 338 aaKnown RBP15.86■□□□□ 0.13
TRIM47-201ENST00000254816 CCL8P80075 99 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 SRSF7Q16629 238 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRIM47-201ENST00000254816 ZNF497Q6ZNH5 498 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 CD177Q8N6Q3 437 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 UBALD1Q8TB05 177 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 SCGB3A2Q96PL1 93 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 ZDHHC8Q9ULC8 765 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 SESN1Q9Y6P5 492 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 PKDREJQ9NTG1 2253 aa15.86■□□□□ 0.13
TRIM47-201ENST00000254816 F5H0A9 414 aaPredicted RBP15.85■□□□□ 0.13
TRIM47-201ENST00000254816 LMO1P25800 156 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 GLP1RP43220 463 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 ZNF880Q6PDB4 577 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 GALNT11Q8NCW6 608 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 OR10Z1Q8NGY1 313 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 NMES1Q9C002 83 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 RASL12Q9NYN1 266 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 TRBV6-6A0A0A6YYG2 114 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 H0YIZ8 118 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 PSG2P11465 335 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 NUP62P37198 522 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms