RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 CGB7P0DN87 165 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 HLA-DMAP28067 261 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 HRH1P35367 487 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 ECI1P42126 302 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 ARPC4P59998 168 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 HLA-DRB3P79483 266 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 OXA1LQ15070 435 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 HMGN3Q15651 99 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 DHRS11Q6UWP2 260 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 FAM216BQ8N7L0 139 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 OR10A7Q8NGE5 316 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 OR4C16Q8NGL9 310 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 C8orf46Q8TAG6 207 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 GIMAP1Q8WWP7 306 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 FAM168AQ92567 244 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 PIMREGQ9BSJ6 248 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 CABLES2Q9BTV7 478 aa10.74□□□□□ -0.69
LSM8-201ENST00000249299 C11orf54Q9H0W9 315 aaPredicted RBP10.74□□□□□ -0.69
LSM8-201ENST00000249299 ZNF230Q9UIE0 474 aaPredicted RBP10.74□□□□□ -0.69
LSM8-201ENST00000249299 UBE2J1Q9Y385 318 aaPredicted RBP10.74□□□□□ -0.69
LSM8-201ENST00000249299 DOPEY2Q9Y3R5 2298 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 USF3Q68DE3 2245 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 FAM240BA0A1B0GVZ2 78 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 A0A1W2PPH5 198 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 MEIS3P1A6NDR6 274 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 VWC2LB2RUY7 222 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 DVL1O14640 695 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 SPINT2O43291 252 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 FCER2P06734 321 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 RPS2P15880 293 aaKnown RBP10.73□□□□□ -0.69
LSM8-201ENST00000249299 GLIPR1P48060 266 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 RFX2P48378 723 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 RAG2P55895 527 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 SEC61A1P61619 476 aaKnown RBP10.73□□□□□ -0.69
LSM8-201ENST00000249299 HTD2P86397 168 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 DEFB113Q30KQ7 82 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 CD276Q5ZPR3 534 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 OR52W1Q6IF63 320 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 ZNF841Q6ZN19 808 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 Q6ZPA2 131 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 ZNF525Q8N782 197 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 OR6F1Q8NGZ6 308 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 C10orf105Q8TEF2 133 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 GALMQ96C23 342 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 RAB39BQ96DA2 213 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 SCGB3A2Q96PL1 93 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 TOLLIPQ9H0E2 274 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 DPAGT1Q9H3H5 408 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 LIME1Q9H400 295 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 SPG11Q96JI7 2443 aa10.73□□□□□ -0.69
LSM8-201ENST00000249299 CENPEQ02224 2701 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 TRBV6-7A0A0A0MS04 114 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 ZNF729A6NN14 1252 aaPredicted RBP10.72□□□□□ -0.69
LSM8-201ENST00000249299 HEXAP06865 529 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 ZNF735P0CB33 412 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 OR5H8P0DN80 308 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 SLC25A16P16260 332 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 NDUFB7P17568 137 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 RCC1P18754 421 aaPredicted RBP10.72□□□□□ -0.69
LSM8-201ENST00000249299 GLP1RP43220 463 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 EDDM3BP56851 147 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 RPL31P62899 125 aaKnown RBP10.72□□□□□ -0.69
LSM8-201ENST00000249299 EDDM3AQ14507 147 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 RBMS2Q15434 407 aaKnown RBP10.72□□□□□ -0.69
LSM8-201ENST00000249299 SURF2Q15527 256 aaPredicted RBP10.72□□□□□ -0.69
LSM8-201ENST00000249299 PLA1AQ53H76 456 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 LY6G6FQ5SQ64 297 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 WDR25Q64LD2 544 aaPredicted RBP10.72□□□□□ -0.69
LSM8-201ENST00000249299 LYPD2Q6UXB3 125 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 ZNF782Q6ZMW2 699 aaPredicted RBP10.72□□□□□ -0.69
LSM8-201ENST00000249299 OR52M1Q8NGK5 317 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 TERB2Q8NHR7 220 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 ENKURQ8TC29 256 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 GAL3ST2Q9H3Q3 398 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 TAF9BQ9HBM6 251 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 CTSZQ9UBR2 303 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 CLN8Q9UBY8 286 aa10.72□□□□□ -0.69
LSM8-201ENST00000249299 IGKV1D-8A0A087WSZ0 117 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 KBTBD11-OT1A0A1B0GTJ5 212 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 A8MXK9 166 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 C15orf65H3BRN8 121 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 F2RL2O00254 374 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 RBP4P02753 201 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 AMY2AP04746 511 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 BTCP35070 178 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 TRIM16LQ309B1 348 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 Q3ZCU0 254 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 AVPI1Q5T686 147 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 ZNF660Q6AZW8 331 aaPredicted RBP10.71□□□□□ -0.69
LSM8-201ENST00000249299 PLET1Q6UQ28 207 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 LHFPL1Q86WI0 220 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 CREB3L1Q96BA8 519 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 DCTN5Q9BTE1 182 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 BPESC1Q9GZL8 116 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 TINAGL1Q9GZM7 467 aaPredicted RBP10.71□□□□□ -0.69
LSM8-201ENST00000249299 MCUBQ9NWR8 336 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 EHFQ9NZC4 300 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 POLR3KQ9Y2Y1 108 aaPredicted RBP10.71□□□□□ -0.69
LSM8-201ENST00000249299 NUBP2Q9Y5Y2 271 aa10.71□□□□□ -0.69
LSM8-201ENST00000249299 TACC2O95359 2948 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms