RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ARL11Q969Q4 196 aa11.37□□□□□ -0.59
GPN3-201ENST00000228827 RBM14Q96PK6 669 aaKnown RBP11.37□□□□□ -0.59
GPN3-201ENST00000228827 OCSTAMPQ9BR26 566 aa11.37□□□□□ -0.59
GPN3-201ENST00000228827 TMED9Q9BVK6 235 aa11.37□□□□□ -0.59
GPN3-201ENST00000228827 SELENOIQ9C0D9 397 aa11.37□□□□□ -0.59
GPN3-201ENST00000228827 WNT10AQ9GZT5 417 aa11.37□□□□□ -0.59
GPN3-201ENST00000228827 IGHV3-43A0A0B4J1X8 118 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 OOSP1A8MZH6 123 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 MCRIP1C9JLW8 97 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 AIPO00170 330 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 OR2F2O95006 317 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 SNRNP70P08621 437 aaKnown RBP11.36□□□□□ -0.59
GPN3-201ENST00000228827 IGHV3-43DP0DP04 118 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 GZMHP20718 246 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 MAPK3P27361 379 aaPredicted RBP11.36□□□□□ -0.59
GPN3-201ENST00000228827 ACSM3Q53FZ2 586 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 C9orf152Q5JTZ5 239 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 FAM53AQ6NSI3 398 aaPredicted RBP11.36□□□□□ -0.59
GPN3-201ENST00000228827 TMEM104Q8NE00 496 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 OR10A7Q8NGE5 316 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 WIPF2Q8TF74 440 aaPredicted RBP11.36□□□□□ -0.59
GPN3-201ENST00000228827 MYDGFQ969H8 173 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 FAM46BQ96A09 425 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 CYYR1Q96J86 154 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 CITED2Q99967 270 aaPredicted RBP11.36□□□□□ -0.59
GPN3-201ENST00000228827 SCN3BQ9NY72 215 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 ETAA1Q9NY74 926 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 DSCAML1Q8TD84 2053 aa11.36□□□□□ -0.59
GPN3-201ENST00000228827 C15orf65H3BRN8 121 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 SDCBPO00560 298 aaPredicted RBP11.35□□□□□ -0.59
GPN3-201ENST00000228827 MT-ND4P03905 459 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 MGMTP16455 207 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 MADCAM1Q13477 382 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 HES1Q14469 280 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 HNF4GQ14541 408 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 MED22Q15528 200 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 FAM27D1Q5T7N8 215 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 RAB12Q6IQ22 244 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 ZNF497Q6ZNH5 498 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 LYPD6Q86Y78 171 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 CDH26Q8IXH8 852 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 DRAM1Q8N682 238 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 OR4K15Q8NH41 348 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 SPACA1Q9HBV2 294 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 RCC2Q9P258 522 aaKnown RBP11.35□□□□□ -0.59
GPN3-201ENST00000228827 TRAPPC2LQ9UL33 140 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 LSM2Q9Y333 95 aaKnown RBP11.35□□□□□ -0.59
GPN3-201ENST00000228827 PEX16Q9Y5Y5 336 aa11.35□□□□□ -0.59
GPN3-201ENST00000228827 A0A1W2PPI3 338 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 A0A1W2PRX2 142 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 AMY1AP04745 511 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 AMY2AP04746 511 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 FAM106CPP0CH98 169 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 REG1BP48304 166 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 GPR50Q13585 617 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 SPHARQ15513 63 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 RBM48Q5RL73 367 aaKnown RBP11.34□□□□□ -0.59
GPN3-201ENST00000228827 SYT6Q5T7P8 510 aaPredicted RBP11.34□□□□□ -0.59
GPN3-201ENST00000228827 RNLSQ5VYX0 342 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 SLC16A12Q6ZSM3 486 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 CENPVQ7Z7K6 275 aaPredicted RBP11.34□□□□□ -0.59
GPN3-201ENST00000228827 NDUFA11Q86Y39 141 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 PRR18Q8N4B5 295 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 NKAIN3Q8N8D7 197 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 OR5AU1Q8NGC0 362 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 THRSPQ92748 146 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 R3HDM4Q96D70 268 aa11.34□□□□□ -0.59
GPN3-201ENST00000228827 MRPS24Q96EL2 167 aaKnown RBP11.34□□□□□ -0.59
GPN3-201ENST00000228827 UBE2QL1A1L167 161 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 ERICH4A6NGS2 130 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 C12orf77C9JDV5 145 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 G3V4G9 280 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 OPN1MWP04001 364 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 OPN1MW2P0DN77 364 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 OPN1MW3P0DN78 364 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 RAB7AP51149 207 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 GP2P55259 537 aaKnown RBP11.33□□□□□ -0.6
GPN3-201ENST00000228827 UNQ9370/PRO34162Q6UXP9 181 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 CEACAM19Q7Z692 300 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 MS4A15Q8N5U1 240 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 Q96M66 194 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 UQCC2Q9BRT2 126 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 GFOD1Q9NXC2 390 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 MOB4Q9Y3A3 225 aa11.33□□□□□ -0.6
GPN3-201ENST00000228827 TET2Q6N021 2002 aaPredicted RBP11.33□□□□□ -0.6
GPN3-201ENST00000228827 IGHV3-72A0A0B4J1Y9 119 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A18PA6NE21 464 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A16PA6NEW6 464 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A20PA6NIJ5 464 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A9PA6NNJ1 464 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A12PA8MX19 464 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A5PA8MXJ8 464 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 H0YHG0 523 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 CCRL2O00421 344 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 HSD17B6O14756 317 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 ORC5O43913 435 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 MPIG6BO95866 241 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A15PP0C7V4 464 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A13PP0C7W8 464 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms