RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TUSC2O75896 110 aa14.77□□□□□ -0.04
USB1-201ENST00000219281 SPINK2P20155 84 aa14.77□□□□□ -0.04
USB1-201ENST00000219281 ICAM4Q14773 271 aa14.77□□□□□ -0.04
USB1-201ENST00000219281 AKR1C8PQ5T2L2 129 aa14.77□□□□□ -0.04
USB1-201ENST00000219281 C1QL4Q86Z23 238 aa14.77□□□□□ -0.04
USB1-201ENST00000219281 ZDHHC23Q8IYP9 409 aa14.77□□□□□ -0.04
USB1-201ENST00000219281 UNKLQ9H9P5 680 aaKnown RBP14.77□□□□□ -0.04
USB1-201ENST00000219281 MMP24Q9Y5R2 645 aa14.77□□□□□ -0.04
USB1-201ENST00000219281 DUXBA0A1W2PPF3 345 aa14.77□□□□□ -0.05
USB1-201ENST00000219281 SCAF4O95104 1147 aaKnown RBP14.77□□□□□ -0.05
USB1-201ENST00000219281 SLC34A2O95436 690 aa14.77□□□□□ -0.05
USB1-201ENST00000219281 HLA-HP01893 362 aa14.77□□□□□ -0.05
USB1-201ENST00000219281 UBE2KP61086 200 aa14.77□□□□□ -0.05
USB1-201ENST00000219281 SRYQ05066 204 aa14.77□□□□□ -0.05
USB1-201ENST00000219281 CEACAM21Q3KPI0 293 aa14.77□□□□□ -0.05
USB1-201ENST00000219281 ACER2Q5QJU3 275 aa14.77□□□□□ -0.05
USB1-201ENST00000219281 MRPL21Q7Z2W9 205 aaKnown RBP14.77□□□□□ -0.05
USB1-201ENST00000219281 ZNF429Q86V71 674 aa14.77□□□□□ -0.05
USB1-201ENST00000219281 CYB561D1Q8N8Q1 229 aa14.77□□□□□ -0.05
USB1-201ENST00000219281 TAAR3PQ9P1P4 343 aa14.77□□□□□ -0.05
USB1-201ENST00000219281 CELSR3Q9NYQ7 3312 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 KIR2DS1A0A191URI9 304 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 TRAPPC2LH3BP13 241 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 PGLYRP1O75594 196 aaPredicted RBP14.76□□□□□ -0.05
USB1-201ENST00000219281 KIR2DS4P43632 304 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 PAX9P55771 341 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 BAXQ07812 192 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 KIR2DS1Q14954 304 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 SP5Q6BEB4 398 aaPredicted RBP14.76□□□□□ -0.05
USB1-201ENST00000219281 SAXO1Q8IYX7 474 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 CMTM1Q8IZ96 169 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 OR5D13Q8NGL4 314 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 SPRY4Q9C004 299 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 MIOXQ9UGB7 285 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 ATP23Q9Y6H3 246 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 AHCTF1Q8WYP5 2266 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 A0A0G2JRQ6 117 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 MMP9P14780 707 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 FOXG1P55316 489 aaPredicted RBP14.76□□□□□ -0.05
USB1-201ENST00000219281 GFRA1P56159 465 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 DLK1P80370 383 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 CT55Q8WUE5 264 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 TMEM45BQ96B21 275 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 ATP5SQ99766 215 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 PRRG4Q9BZD6 226 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 OR51M1Q9H341 326 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 RNF115Q9Y4L5 304 aa14.76□□□□□ -0.05
USB1-201ENST00000219281 KNTC1P50748 2209 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 A0A1W2PNU3 283 aaPredicted RBP14.75□□□□□ -0.05
USB1-201ENST00000219281 H0Y980 276 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 PPIHO43447 177 aaKnown RBP14.75□□□□□ -0.05
USB1-201ENST00000219281 SYNGR1O43759 233 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 KIAA0141Q14154 515 aaPredicted RBP14.75□□□□□ -0.05
USB1-201ENST00000219281 ZNF506Q5JVG8 444 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 ZNF343Q6P1L6 599 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 C6orf15Q6UXA7 325 aaPredicted RBP14.75□□□□□ -0.05
USB1-201ENST00000219281 C20orf204Q6ZNR8 217 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 P4HA3Q7Z4N8 544 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 MKXQ8IYA7 352 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 PCSK5Q92824 1860 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 C3orf80F5H4A9 247 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 H3BP45 60 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 ATXN7O15265 892 aaPredicted RBP14.75□□□□□ -0.05
USB1-201ENST00000219281 CTXN2P0C2S0 81 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 CEACAM1P13688 526 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 CYB561P49447 251 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 MPV17LQ2QL34 196 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 CLDND2Q8NHS1 167 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 ZNF488Q96MN9 340 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 WSB1Q9Y6I7 421 aa14.75□□□□□ -0.05
USB1-201ENST00000219281 ZNF503-AS2A6NEH8 195 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 CDX4O14627 284 aaPredicted RBP14.74□□□□□ -0.05
USB1-201ENST00000219281 HS3ST1O14792 307 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 YIF1AO95070 293 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 IGHEP01854 428 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 HSPB1P04792 205 aaKnown RBP14.74□□□□□ -0.05
USB1-201ENST00000219281 CD59P13987 128 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 RPL23AP62750 156 aaKnown RBP14.74□□□□□ -0.05
USB1-201ENST00000219281 TLE4Q04727 773 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 IL24Q13007 206 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 NRN1LQ496H8 165 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 PLA2G2CQ5R387 149 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 SPINK14Q6IE38 97 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 PCSK4Q6UW60 755 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 THNSL2Q86YJ6 484 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 MRPL30Q8TCC3 161 aaKnown RBP14.74□□□□□ -0.05
USB1-201ENST00000219281 GPR146Q96CH1 333 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 TMPRSS5Q9H3S3 457 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 ZNF552Q9H707 407 aaPredicted RBP14.74□□□□□ -0.05
USB1-201ENST00000219281 URGCP-MRPS24S4R325 110 aa14.74□□□□□ -0.05
USB1-201ENST00000219281 C9orf172C9J069 976 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 NGFP01138 241 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 CXCL1P09341 107 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 F2RP25116 425 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 TAS2R30P59541 319 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 TMEM267Q0VDI3 215 aaPredicted RBP14.73□□□□□ -0.05
USB1-201ENST00000219281 IZUMO4Q1ZYL8 232 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 TUSC5Q8IXB3 177 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 OR51H1Q8NH63 302 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 Q8WTZ3 238 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms