RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 FAHD2AQ96GK7 314 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 MBNL3Q9NUK0 354 aaKnown RBP10.85□□□□□ -0.67
TIMP1-201ENST00000218388 CALYQ9NYX4 217 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 AUP1Q9Y679 476 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 ARHGAP32A7KAX9 2087 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 OTOGQ6ZRI0 2925 aa10.85□□□□□ -0.67
TIMP1-201ENST00000218388 KIAA2026Q5HYC2 2103 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 KBTBD11-OT1A0A1B0GTJ5 212 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 FABP12A6NFH5 140 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 SULT1C2O00338 296 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 TOX4O94842 621 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 FCGR3AP08637 254 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 CCL3L1P16619 93 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 PRSS3P35030 304 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 KIR2DS4P43632 304 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 ARF6P62330 175 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 MRPS10P82664 201 aaKnown RBP10.84□□□□□ -0.67
TIMP1-201ENST00000218388 PAX8Q06710 450 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 IL18Q14116 193 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 KIR2DS1Q14954 304 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 CR1LQ2VPA4 569 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 PYHIN1Q6K0P9 492 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 LINC00299Q6ZSB3 139 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 C1orf122Q6ZSJ8 110 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 TCF23Q7RTU1 214 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 SNX29P2Q8IUI4 249 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 DTX3Q8N9I9 347 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 NUDCD2Q8WVJ2 157 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 HDHD3Q9BSH5 251 aaPredicted RBP10.84□□□□□ -0.67
TIMP1-201ENST00000218388 C7orf69Q9H7B7 122 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 METTL8Q9H825 291 aaKnown RBP10.84□□□□□ -0.67
TIMP1-201ENST00000218388 SCPEP1Q9HB40 452 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 ZNF286AQ9HBT8 521 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 ABCA1O95477 2261 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 WNK2Q9Y3S1 2297 aa10.84□□□□□ -0.67
TIMP1-201ENST00000218388 MEX3AA1L020 520 aaKnown RBP10.83□□□□□ -0.68
TIMP1-201ENST00000218388 C17orf98A8MV24 154 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 HLA-DQB1P01920 261 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 LPLP06858 475 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 RCC1P18754 421 aaPredicted RBP10.83□□□□□ -0.68
TIMP1-201ENST00000218388 ERVFRD-1P60508 538 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 SRSF7Q16629 238 aaKnown RBP eCLIP10.83□□□□□ -0.68
TIMP1-201ENST00000218388 TMEM30BQ3MIR4 351 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 OR52W1Q6IF63 320 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 ZNF880Q6PDB4 577 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 FAM131AQ6UXB0 335 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 HEPN1Q6WQI6 88 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 OR10A7Q8NGE5 316 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 ARL11Q969Q4 196 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 TAF9BQ9HBM6 251 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 Q9N2K0 584 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 IFT46Q9NQC8 304 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 YAE1D1Q9NRH1 226 aa10.83□□□□□ -0.68
TIMP1-201ENST00000218388 TRAV39A0A0B4J263 110 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 A8MV72 311 aaPredicted RBP10.82□□□□□ -0.68
TIMP1-201ENST00000218388 C12orf77C9JDV5 145 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 PRTN3P24158 256 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 PTBP1P26599 531 aaKnown RBP eCLIP10.82□□□□□ -0.68
TIMP1-201ENST00000218388 SSTR5P35346 364 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 DLX6P56179 175 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 HLA-DRB3P79483 266 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 KRTAP1-1Q07627 177 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 MADCAM1Q13477 382 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 HMGN3Q15651 99 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 C17orf58Q2M2W7 97 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 NCR3LG1Q68D85 454 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 CLEC9AQ6UXN8 241 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 VMO1Q7Z5L0 202 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 CCDC190Q86UF4 302 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 PRR18Q8N4B5 295 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 GALMQ96C23 342 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 CYYR1Q96J86 154 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 OCSTAMPQ9BR26 566 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 PCGF1Q9BSM1 259 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 TMPRSS13Q9BYE2 586 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 SIRPDQ9H106 197 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 LINC00574Q9H8X3 128 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 IDI2-AS1Q9NZ38 188 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 ELF5Q9UKW6 265 aaPredicted RBP10.82□□□□□ -0.68
TIMP1-201ENST00000218388 SESN1Q9Y6P5 492 aa10.82□□□□□ -0.68
TIMP1-201ENST00000218388 TRDCB7Z8K6 153 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 NPIPB11E5RHQ5 1161 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 SSX5O60225 188 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 HBZP02008 142 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 CGB3P0DN86 165 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 CGB7P0DN87 165 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 IGHV1-8P0DP01 117 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 PTHLHP12272 177 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 MMP9P14780 707 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 HNF1AP20823 631 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 FPR2P25090 351 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 ETV6P41212 452 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 PRAMEF5Q5TYX0 476 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 Q6ZS49 121 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 OR52M1Q8NGK5 317 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 FCAMRQ8WWV6 532 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 ST6GALNAC5Q9BVH7 336 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 HEXA-AS1Q9H8Q6 139 aa10.81□□□□□ -0.68
TIMP1-201ENST00000218388 UNKLQ9H9P5 680 aaKnown RBP10.81□□□□□ -0.68
TIMP1-201ENST00000218388 TMEM160Q9NX00 188 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms