RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 C5orf24Q7Z6I8 188 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 STX12Q86Y82 276 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 MRPL30Q8TCC3 161 aaKnown RBP11.37□□□□□ -0.59
SRP54-201ENST00000216774 RAB39BQ96DA2 213 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 PRDM6Q9NQX0 595 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 IL36RNQ9UBH0 155 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 LIPGQ9Y5X9 500 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 TNRC6AQ8NDV7 1962 aaKnown RBP11.37□□□□□ -0.59
SRP54-201ENST00000216774 A0A096LPE4 126 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 A0A1W2PPZ6 126 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 CXorf65A6NEN9 183 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 SCAF4O95104 1147 aaKnown RBP11.37□□□□□ -0.59
SRP54-201ENST00000216774 HLA-HP01893 362 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 FABP1P07148 127 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 NQO2P16083 231 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 EPHA1P21709 976 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 ARR3P36575 388 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 LHX2P50458 406 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 ZNF154Q13106 437 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 C6orf15Q6UXA7 325 aaPredicted RBP11.37□□□□□ -0.59
SRP54-201ENST00000216774 UBALD2Q8IYN6 164 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 OR10G4Q8NGN3 311 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 CLDND2Q8NHS1 167 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 RAB40CQ96S21 281 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 GPHA2Q96T91 129 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 FAM173AQ9BQD7 235 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 OR2W1Q9Y3N9 320 aa11.37□□□□□ -0.59
SRP54-201ENST00000216774 LRP5LA4QPB2 252 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 HSPB6O14558 160 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 TDGF1P13385 188 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 UBE2KP61086 200 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 RPL23AP62750 156 aaKnown RBP11.36□□□□□ -0.59
SRP54-201ENST00000216774 HAGHQ16775 308 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 KHDC3LQ587J8 217 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 ZNF324BQ6AW86 544 aaPredicted RBP11.36□□□□□ -0.59
SRP54-201ENST00000216774 ZNF880Q6PDB4 577 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 SLC35E3Q7Z769 313 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 ZNF429Q86V71 674 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 OR10J5Q8NHC4 309 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 MAFAQ8NHW3 353 aaPredicted RBP11.36□□□□□ -0.59
SRP54-201ENST00000216774 CT55Q8WUE5 264 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 OR5P3Q8WZ94 311 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 PSMF1Q92530 271 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 ZNF552Q9H707 407 aaPredicted RBP11.36□□□□□ -0.59
SRP54-201ENST00000216774 SIRT7Q9NRC8 400 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 GSN-AS1Q9NRJ2 163 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 LRFN1Q9P244 771 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 B4GALT7Q9UBV7 327 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 WSB1Q9Y6I7 421 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 CNTRLQ7Z7A1 2325 aa11.36□□□□□ -0.59
SRP54-201ENST00000216774 PATE3B3GLJ2 98 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 SERPINE2P07093 398 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 CCL2P13500 99 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 TAGLN2P37802 199 aaKnown RBP11.35□□□□□ -0.59
SRP54-201ENST00000216774 CLDN18P56856 261 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 RUNX1Q01196 453 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 ZNF573Q86YE8 665 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 H1FOOQ8IZA3 346 aaPredicted RBP11.35□□□□□ -0.59
SRP54-201ENST00000216774 POM121L2Q96KW2 1035 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 NIPSNAP3BQ9BS92 247 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 CABLES2Q9BTV7 478 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 PRRG4Q9BZD6 226 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 TMPRSS5Q9H3S3 457 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 ZNF703Q9H7S9 590 aaPredicted RBP11.35□□□□□ -0.59
SRP54-201ENST00000216774 NIT2Q9NQR4 276 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 OR5B21A6NL26 309 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 CD300LBA8K4G0 201 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 NPIPB11E5RHQ5 1161 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 TXNL1O43396 289 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 TNFSF12O43508 249 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 SYNGR1O43759 233 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 CLN5O75503 358 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 SYNGR4O95473 234 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 IFNA5P01569 189 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 HLA-DRB3P79483 266 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 C9orf135Q5VTT2 229 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 TUSC5Q8IXB3 177 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 CYB561D1Q8N8Q1 229 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 OR2M7Q8NG81 312 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 TVP23CQ96ET8 276 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 OR51M1Q9H341 326 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 MPC1Q9Y5U8 109 aa11.35□□□□□ -0.59
SRP54-201ENST00000216774 ZNF503-AS2A6NEH8 195 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 DEGS1O15121 323 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 DLK1P80370 383 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 SRYQ05066 204 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 SPINK14Q6IE38 97 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 TCEAL6Q6IPX3 200 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 C20orf204Q6ZNR8 217 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 LSM10Q969L4 123 aaKnown RBP11.34□□□□□ -0.59
SRP54-201ENST00000216774 CALHM2Q9HA72 323 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 TRAV24A0A0B4J272 114 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 ANKRD30BLA7E2S9 258 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 KIAA1324LA8MWY0 1029 aaPredicted RBP11.34□□□□□ -0.59
SRP54-201ENST00000216774 H0YL77 283 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 PPIHO43447 177 aaKnown RBP11.34□□□□□ -0.59
SRP54-201ENST00000216774 CNOT4O95628 575 aaKnown RBP11.34□□□□□ -0.59
SRP54-201ENST00000216774 NGFP01138 241 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 S100PP25815 95 aa11.34□□□□□ -0.59
SRP54-201ENST00000216774 RPS10P46783 165 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms