RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SUMF2Q8NBJ7 301 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 SCRT1Q9BWW7 348 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 CACNA1GO43497 2377 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 CD300LBA8K4G0 201 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 NKX2-8O15522 239 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 OR2C1O95371 312 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 CELA3BP08861 270 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 OR8U8P0C7N1 319 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 FOLR2P14207 255 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 S100PP25815 95 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 WNT5AP41221 380 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 PDZD11Q5EBL8 140 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 MYPOPQ86VE0 399 aaPredicted RBP11.23□□□□□ -0.61
CTNS-201ENST00000046640 PRR18Q8N4B5 295 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 APOBEC3DQ96AK3 386 aaPredicted RBP11.23□□□□□ -0.61
CTNS-201ENST00000046640 POM121L2Q96KW2 1035 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 HIST1H2AAQ96QV6 131 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 SLC35B3Q9H1N7 401 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 SEBOXQ9HB31 216 aaPredicted RBP11.23□□□□□ -0.61
CTNS-201ENST00000046640 SPRR3Q9UBC9 169 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 ESPL1Q14674 2120 aa11.23□□□□□ -0.61
CTNS-201ENST00000046640 TRAPPC2LH3BP13 241 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 RHBDL1O75783 438 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 PPYP01298 95 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 SEC11BP0C7V7 166 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 AGAP20933 346 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 CCL11P51671 97 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 HOXA4Q00056 320 aaPredicted RBP11.22□□□□□ -0.61
CTNS-201ENST00000046640 EWSR1Q01844 656 aaKnown RBP eCLIP11.22□□□□□ -0.61
CTNS-201ENST00000046640 CXorf66Q5JRM2 361 aaPredicted RBP11.22□□□□□ -0.61
CTNS-201ENST00000046640 LGI3Q8N145 548 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 MSI2Q96DH6 328 aaKnown RBP11.22□□□□□ -0.61
CTNS-201ENST00000046640 LINC00470Q9BZP3 86 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 TMEM9BQ9NQ34 198 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 UBE2J1Q9Y385 318 aaPredicted RBP11.22□□□□□ -0.61
CTNS-201ENST00000046640 GVINP1Q7Z2Y8 2422 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 KIAA2026Q5HYC2 2103 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 MED12LQ86YW9 2145 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 H3BP45 60 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 HSD17B6O14756 317 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 IL18BPO95998 194 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 ERVS71-1P61550 626 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 CLN3Q13286 438 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 FER1L6-AS2Q96M78 137 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 GINS3Q9BRX5 216 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 KLF13Q9Y2Y9 288 aaPredicted RBP11.22□□□□□ -0.61
CTNS-201ENST00000046640 ARHGAP21Q5T5U3 1957 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 IGHV2-70P01814 119 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 CD46P15529 392 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 ATP6V0CP27449 155 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 TRIP6Q15654 476 aaKnown RBP11.22□□□□□ -0.61
CTNS-201ENST00000046640 CEACAM21Q3KPI0 293 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 ZNF766Q5HY98 468 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 C20orf204Q6ZNR8 217 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 MDP1Q86V88 176 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 MDS2Q8NDY4 140 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 LYPD6BQ8NI32 183 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 POMT1Q9Y6A1 747 aa11.22□□□□□ -0.61
CTNS-201ENST00000046640 SPAARA0A1B0GVQ0 90 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 IGSF23A1L1A6 192 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 H0YL77 283 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 APLNRP35414 380 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 ECI1P42126 302 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 NDUFA6P56556 154 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 HNF4GQ14541 408 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 HMGN3Q15651 99 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 ZNF695Q8IW36 515 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 IL1F10Q8WWZ1 152 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 C18orf12Q96KH6 178 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 SYT3Q9BQG1 590 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 PBDC1Q9BVG4 233 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 EGLN1Q9GZT9 426 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 DECR2Q9NUI1 292 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 IL36GQ9NZH8 169 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 CEP250Q9BV73 2442 aa11.21□□□□□ -0.61
CTNS-201ENST00000046640 TRGV5A0A0B4J1U4 118 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 IGKV1D-13A0A0B4J2D9 117 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 SLC22A20A6NK97 555 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 ZNF724A8MTY0 619 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 H7C1Q1 480 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 LYZL6O75951 148 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 IGKV1-13P0DP09 117 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 EPHA1P21709 976 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 GNRHRP30968 328 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 RPS23P62266 143 aaKnown RBP11.21□□□□□ -0.62
CTNS-201ENST00000046640 MKXQ8IYA7 352 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 OR2C3Q8N628 320 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 MOB3AQ96BX8 217 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 OTOGLQ3ZCN5 2332 aa11.21□□□□□ -0.62
CTNS-201ENST00000046640 C3orf85A0A1B0GTC6 90 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 RPL36A-HNRNPH2H7BZ11 118 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 ADAM20O43506 726 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 KIAA0141Q14154 515 aaPredicted RBP11.2□□□□□ -0.62
CTNS-201ENST00000046640 IZUMO4Q1ZYL8 232 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 TMEM211Q6ICI0 200 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 OR5C1Q8NGR4 320 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 OR1J1Q8NGS3 322 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 ANKRD30BLA7E2S9 258 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 ARR3P36575 388 aa11.2□□□□□ -0.62
CTNS-201ENST00000046640 TAGLN2P37802 199 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms