RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 MRGPRFQ96AM1 343 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 OR2J1Q9GZK6 312 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 MAP1LC3BQ9GZQ8 125 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 OR51I2Q9H344 312 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 NPDC1Q9NQX5 325 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-216ENST00000639300 ZNF71Q9NQZ8 489 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-216ENST00000639300 NOTCH3Q9UM47 2321 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 HABP2Q14520 560 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-216ENST00000639300 IGSF11Q5DX21 431 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 FFAR4Q5NUL3 377 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 TMEM211Q6ICI0 200 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 FLVCR1-AS1Q8TAF5 88 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 BTF3L4Q96K17 158 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 SOX7Q9BT81 388 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 GPR132Q9UNW8 380 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 LIPGQ9Y5X9 500 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 C21orf140B9A014 251 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 TMEM251Q8N6I4 163 aa12.56□□□□□ -0.4
SCARB2-216ENST00000639300 FCGR3AP08637 254 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 VAX1Q5SQQ9 334 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 OR5A2Q8NGI9 324 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 SLC25A40Q8TBP6 338 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 CCL17Q92583 94 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 WDR90Q96KV7 1748 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 TTTY12Q9BZ98 90 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 RTN4RQ9BZR6 473 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 ABCA4P78363 2273 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 NHLH2Q02577 135 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 FBXW9Q5XUX1 488 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 HES7Q9BYE0 225 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 J3QT63 122 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 DVL1O14640 695 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 CRYABP02511 175 aaKnown RBP12.55□□□□□ -0.4
SCARB2-216ENST00000639300 SP1P08047 785 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 UBE2V2Q15819 145 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 ETV3LQ6ZN32 361 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 MDP1Q86V88 176 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 IGKV3D-11A0A0A0MRZ8 115 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 ZNF320A2RRD8 509 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 STUMQ69YW2 141 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 NUFIP2Q7Z417 695 aaKnown RBP12.55□□□□□ -0.4
SCARB2-216ENST00000639300 TPRX1Q8N7U7 411 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 CPEB3Q8NE35 698 aaKnown RBP12.55□□□□□ -0.4
SCARB2-216ENST00000639300 TMEM37Q8WXS4 190 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 PILRBQ9UKJ0 227 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 MYO7BQ6PIF6 2116 aa12.55□□□□□ -0.4
SCARB2-216ENST00000639300 B4E171 279 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 HSBP1L1C9JCN9 74 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 ACTL6AO96019 429 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 ZNF17P17021 662 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 TSPAN7P41732 249 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 C19orf57Q0VDD7 668 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 TMEM65Q6PI78 240 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 CORO2AQ92828 525 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 MGAMO43451 1857 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 PRSS44E7EML9 344 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 C1QL1O75973 258 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 RBM11P57052 281 aaKnown RBP12.54□□□□□ -0.4
SCARB2-216ENST00000639300 PCOLCEQ15113 449 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 MPV17LQ2QL34 196 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 SIP14410 1827 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 TNFRSF1AP19438 455 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 UBE2G1P62253 170 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 CLPPQ16740 277 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-216ENST00000639300 FDX2Q6P4F2 183 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
SCARB2-216ENST00000639300 PHF3Q92576 2039 aaKnown RBP12.54□□□□□ -0.4
SCARB2-216ENST00000639300 PMELP40967 661 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 EWSR1Q01844 656 aaKnown RBP eCLIP12.54□□□□□ -0.4
SCARB2-216ENST00000639300 FABP9Q0Z7S8 132 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 PRR27Q6MZM9 219 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 LINC00114Q6XXX2 140 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 LRFN3Q9BTN0 628 aa12.54□□□□□ -0.4
SCARB2-216ENST00000639300 CADP27708 2225 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 KLF3P57682 345 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-216ENST00000639300 AWAT1Q58HT5 328 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 ZNF331Q9NQX6 463 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-216ENST00000639300 RCC2Q9P258 522 aaKnown RBP12.53□□□□□ -0.4
SCARB2-216ENST00000639300 TCF20Q9UGU0 1960 aaKnown RBP12.53□□□□□ -0.4
SCARB2-216ENST00000639300 PRR32B1ATL7 298 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 P2RY1P47900 373 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 P2RY4P51582 365 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 TAS2R45P59539 299 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 AQP3Q92482 292 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 WNT2BQ93097 391 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 FER1L5A0AVI2 2057 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 RBFOX3A6NFN3 312 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 RPS2P15880 293 aaKnown RBP12.53□□□□□ -0.4
SCARB2-216ENST00000639300 IL24Q13007 206 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 PLAC9Q5JTB6 97 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 CDCP2Q5VXM1 449 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 OR1K1Q8NGR3 316 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 TIMD4Q96H15 378 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 OR2W1Q9Y3N9 320 aa12.53□□□□□ -0.4
SCARB2-216ENST00000639300 ZNF646O15015 1829 aaPredicted RBP12.53□□□□□ -0.4
SCARB2-216ENST00000639300 OR5H1A6NKK0 313 aa12.52□□□□□ -0.4
SCARB2-216ENST00000639300 CDS2O95674 445 aa12.52□□□□□ -0.4
SCARB2-216ENST00000639300 SCTP09683 121 aa12.52□□□□□ -0.4
SCARB2-216ENST00000639300 NTF3P20783 257 aa12.52□□□□□ -0.4
SCARB2-216ENST00000639300 MDH2P40926 338 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 364.2 ms