RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 KPTNQ9Y664 436 aa2.76□□□□□ -1.97
U1.39-201ENST00000621562 ANKHD1Q8IWZ3 2542 aaKnown RBP2.76□□□□□ -1.97
U1.39-201ENST00000621562 NBASA2RRP1 2371 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 ASPMQ8IZT6 3477 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 WNK2Q9Y3S1 2297 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 BORCS7-ASMTA0A0B4J1R7 106 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 C3orf85A0A1B0GTC6 90 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 A0A1W2PPH5 198 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 MED19A0JLT2 244 aaPredicted RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 C7orf77A4D0Y5 90 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 FAM24AA6NFZ4 105 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 C5orf52A6NGY3 159 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 C1QTNF9BB2RNN3 333 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 PROB1E7EW31 1015 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 H0Y980 276 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 H7C2Y5 167 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 LINC01387J3KSC0 135 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 J3QT63 122 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 UBE2CO00762 179 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 AGPAT2O15120 278 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 MPPED1O15442 326 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 ST8SIA3O43173 380 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 PHF1O43189 567 aaPredicted RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 PPIHO43447 177 aaKnown RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 ADAM20O43506 726 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 SYNGR1O43759 233 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 EIF3GO75821 320 aaKnown RBP eCLIP2.75□□□□□ -1.97
U1.39-201ENST00000621562 OR7C1O76099 320 aaPredicted RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 SLC34A2O95436 690 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 SCGB1D2O95969 90 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 IL18BPO95998 194 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 NGFP01138 241 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 IGLV2-14P01704 120 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 IGHV3-9P01782 118 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 IGHV2-5P01817 119 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 HLA-HP01893 362 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 IFNA4P05014 189 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 SRP19P09132 144 aaKnown RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 SCTP09683 121 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 OR8U8P0C7N1 319 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 P0C879 139 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 GLI4P10075 376 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 MMP9P14780 707 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 TCN2P20062 427 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 ATP6V0CP27449 155 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 GUCA1AP43080 201 aaPredicted RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 GLP1RP43220 463 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 PPT1P50897 306 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 RAB5CP51148 216 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 GPM6AP51674 278 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 DYNLT3P51808 116 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 ERVK11-1P61568 191 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 RPS23P62266 143 aaKnown RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 POLR2GP62487 172 aaKnown RBP eCLIP2.75□□□□□ -1.97
U1.39-201ENST00000621562 SRPXP78539 464 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 CCL20P78556 96 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 ID3Q02535 119 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 MALLQ13021 153 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 SSPNQ14714 243 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 ICAM4Q14773 271 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 TGIF1Q15583 401 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 HMGN3Q15651 99 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 TSC22D1Q15714 1073 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 IGFBP7Q16270 282 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 C3AR1Q16581 482 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 HAGHQ16775 308 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 MPV17LQ2QL34 196 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 CEACAM21Q3KPI0 293 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 ABCA11PQ4W5N1 156 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 HIKESHIQ53FT3 197 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 CXorf66Q5JRM2 361 aaPredicted RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 TCEAL6Q6IPX3 200 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 EIF5AL1Q6IS14 154 aaKnown RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 C6orf15Q6UXA7 325 aaPredicted RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 TMEM182Q6ZP80 229 aaPredicted RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 SSX7Q7RTT5 188 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 NUFIP2Q7Z417 695 aaKnown RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 DPPA2Q7Z7J5 298 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 LINC00596Q86U02 117 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 TBC1D26Q86UD7 250 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 ZDHHC23Q8IYP9 409 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 H1FOOQ8IZA3 346 aaPredicted RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 C17orf78Q8N4C9 275 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 OR2C3Q8N628 320 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 TMEM251Q8N6I4 163 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 C15orf54Q8N8G6 183 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 HSD17B11Q8NBQ5 300 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 NAXEQ8NCW5 288 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 MDS2Q8NDY4 140 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 OR5D13Q8NGL4 314 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 SFT2D1Q8WV19 159 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 OR5P3Q8WZ94 311 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 PIGCQ92535 297 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 BCL2L2Q92843 193 aaPredicted RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 TCEAL3Q969E4 200 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 IL22RA2Q969J5 263 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 APOBEC3DQ96AK3 386 aaPredicted RBP2.75□□□□□ -1.97
U1.39-201ENST00000621562 C5orf30Q96GV9 206 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 AKR1E2Q96JD6 320 aa2.75□□□□□ -1.97
U1.39-201ENST00000621562 ZNF488Q96MN9 340 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms