RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SSR4P51571 173 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 AMER3Q8N944 861 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 PHF3Q92576 2039 aaKnown RBP13.36□□□□□ -0.27
COL5A1-208ENST00000618395 M0QZ24 198 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 MPLP40238 635 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 ZNF362Q5T0B9 420 aaPredicted RBP13.36□□□□□ -0.27
COL5A1-208ENST00000618395 TTC9BQ8N6N2 239 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 RIMBP3CA6NJZ7 1639 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 RIMBP3BA6NNM3 1639 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 RIMBP3Q9UFD9 1639 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 SYNGR2O43760 224 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 CD70P32970 193 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 C7orf66A4D0T2 115 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 LDLRAD4O15165 306 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 ZFPL1O95159 310 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 FZD5Q13467 585 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 KLF9Q13886 244 aaPredicted RBP13.36□□□□□ -0.27
COL5A1-208ENST00000618395 SLC45A1Q9Y2W3 748 aa13.36□□□□□ -0.27
COL5A1-208ENST00000618395 PLPP1O14494 284 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 IGHV4-34P06331 123 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 SRIP30626 198 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 RBPMS2Q6ZRY4 209 aaKnown RBP13.35□□□□□ -0.27
COL5A1-208ENST00000618395 HSD11B1LQ7Z5J1 315 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 MOGAT3Q86VF5 341 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 TCEAL8Q8IYN2 117 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 PTX4Q96A99 478 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 WNT5BQ9H1J7 359 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 LRP12Q9Y561 859 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 CTSDP07339 412 aaPredicted RBP13.35□□□□□ -0.27
COL5A1-208ENST00000618395 MGPP08493 103 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 Q8IYB0 196 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 OR10D3Q8NH80 312 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 TNFRSF14Q92956 283 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 VDAC1P21796 283 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 KISS1Q15726 138 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 MRPL52Q86TS9 123 aaKnown RBP13.35□□□□□ -0.27
COL5A1-208ENST00000618395 KLK2P20151 261 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 MRGPRX4Q96LA9 322 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 TXNDC17Q9BRA2 123 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 WNT10AQ9GZT5 417 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 ERRFI1Q9UJM3 462 aaPredicted RBP13.35□□□□□ -0.27
COL5A1-208ENST00000618395 C7orf71A4D174 169 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 TRGV10A0A0A0MS01 117 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 GFYI3L273 518 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 PLA2G10O15496 165 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 FTH1P19P0C7X4 201 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 ATP6V0CP27449 155 aa13.35□□□□□ -0.27
COL5A1-208ENST00000618395 YBX1P67809 324 aaKnown RBP13.35□□□□□ -0.27
COL5A1-208ENST00000618395 OTOSQ8NHW6 89 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 C11orf40Q8WZ69 217 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 LAT2Q9GZY6 243 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 LYRM4Q9HD34 91 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 GCM2O75603 506 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-208ENST00000618395 TMEM50AO95807 157 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 ERGP11308 486 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 SMOC1Q9H4F8 434 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 CDC14BO60729 498 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 LPAR6P43657 344 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 KCNAB1Q14722 419 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 MAP1LC3AQ9H492 121 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 PRSS8Q16651 343 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 RNFT1Q5M7Z0 435 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 MGST2Q99735 147 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 VMA21Q3ZAQ7 101 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 AICDAQ9GZX7 198 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 NUTF2P61970 127 aaKnown RBP13.34□□□□□ -0.27
COL5A1-208ENST00000618395 ESDP10768 282 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 TMEM40Q8WWA1 233 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 CA10Q9NS85 328 aa13.34□□□□□ -0.27
COL5A1-208ENST00000618395 IGHEP01854 428 aa13.33□□□□□ -0.27
COL5A1-208ENST00000618395 RBPJQ06330 500 aa13.33□□□□□ -0.27
COL5A1-208ENST00000618395 WNT2BQ93097 391 aa13.33□□□□□ -0.27
COL5A1-208ENST00000618395 EPHX3Q9H6B9 360 aa13.33□□□□□ -0.27
COL5A1-208ENST00000618395 CD46P15529 392 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 MARCH11A6NNE9 402 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 ZNF683Q8IZ20 524 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 PSMG4Q5JS54 123 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 BHLHA15Q7RTS1 189 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-208ENST00000618395 SHANK1Q9Y566 2161 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 SPRY1O43609 319 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-208ENST00000618395 SPANXN1Q5VSR9 72 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 GVQW1Q8N7I0 195 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 ZNF257Q9Y2Q1 563 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-208ENST00000618395 FOCADQ5VW36 1801 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 LANCL1O43813 399 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 SPINK9Q5DT21 86 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 TCF23Q7RTU1 214 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 CA13Q8N1Q1 262 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 APOOQ9BUR5 198 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 HKR1P10072 659 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 P2RY2P41231 377 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 DCDP81605 110 aaKnown RBP13.33□□□□□ -0.28
COL5A1-208ENST00000618395 ZNF414Q96IQ9 312 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 IL36GQ9NZH8 169 aa13.33□□□□□ -0.28
COL5A1-208ENST00000618395 GRIFINA4D1Z8 144 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 LIM2P55344 173 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 CAMKMTQ7Z624 323 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 NUDT8Q8WV74 236 aa13.32□□□□□ -0.28
COL5A1-208ENST00000618395 WBP2Q969T9 261 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms