RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 RBM39Q14498 530 aaKnown RBP20.23■□□□□ 0.83
VEGFA-228ENST00000617771 TPTE2P1Q5T6R2 138 aa20.23■□□□□ 0.83
VEGFA-228ENST00000617771 CCDC144NLQ6NUI1 221 aa20.23■□□□□ 0.83
VEGFA-228ENST00000617771 AHSA2Q719I0 299 aa20.23■□□□□ 0.83
VEGFA-228ENST00000617771 SUMF2Q8NBJ7 301 aa20.23■□□□□ 0.83
VEGFA-228ENST00000617771 PLPPR1Q8TBJ4 325 aa20.23■□□□□ 0.83
VEGFA-228ENST00000617771 FBLIM1Q8WUP2 373 aa20.23■□□□□ 0.83
VEGFA-228ENST00000617771 IDI2-AS1Q9NZ38 188 aa20.23■□□□□ 0.83
VEGFA-228ENST00000617771 OOSP1A8MZH6 123 aa20.22■□□□□ 0.83
VEGFA-228ENST00000617771 BLCAPP62952 87 aa20.22■□□□□ 0.83
VEGFA-228ENST00000617771 GPR176Q14439 515 aa20.22■□□□□ 0.83
VEGFA-228ENST00000617771 MPV17LQ2QL34 196 aa20.22■□□□□ 0.83
VEGFA-228ENST00000617771 BPIFB6Q8NFQ5 453 aa20.22■□□□□ 0.83
VEGFA-228ENST00000617771 MMP28Q9H239 520 aa20.22■□□□□ 0.83
VEGFA-228ENST00000617771 LINC00574Q9H8X3 128 aa20.22■□□□□ 0.83
VEGFA-228ENST00000617771 LIN7BQ9HAP6 207 aa20.22■□□□□ 0.83
VEGFA-228ENST00000617771 AMMECR1Q9Y4X0 333 aaPredicted RBP20.22■□□□□ 0.83
VEGFA-228ENST00000617771 PNMA8CA0A1B0GUJ8 204 aa20.21■□□□□ 0.83
VEGFA-228ENST00000617771 GEMIN2O14893 280 aaKnown RBP20.21■□□□□ 0.83
VEGFA-228ENST00000617771 FBXO24O75426 580 aa20.21■□□□□ 0.83
VEGFA-228ENST00000617771 GTF2F2P13984 249 aa20.21■□□□□ 0.83
VEGFA-228ENST00000617771 MNDAP41218 407 aa20.21■□□□□ 0.83
VEGFA-228ENST00000617771 VDAC2P45880 294 aaPredicted RBP20.21■□□□□ 0.83
VEGFA-228ENST00000617771 WNT4P56705 351 aa20.21■□□□□ 0.83
VEGFA-228ENST00000617771 SLC22A6Q4U2R8 563 aa20.21■□□□□ 0.83
VEGFA-228ENST00000617771 LAIR2Q6ISS4 152 aa20.21■□□□□ 0.83
VEGFA-228ENST00000617771 MRGPRDQ8TDS7 321 aa20.21■□□□□ 0.83
VEGFA-228ENST00000617771 OR14A2Q96R54 314 aa20.21■□□□□ 0.83
VEGFA-228ENST00000617771 TRAV8-7A0A075B6U6 113 aa20.2■□□□□ 0.82
VEGFA-228ENST00000617771 TRBV5-7A0A0A0MS05 114 aa20.2■□□□□ 0.82
VEGFA-228ENST00000617771 LY6LH3BQJ8 138 aa20.2■□□□□ 0.82
VEGFA-228ENST00000617771 CD24P25063 80 aa20.2■□□□□ 0.82
VEGFA-228ENST00000617771 PDLIM3Q53GG5 364 aaPredicted RBP20.2■□□□□ 0.82
VEGFA-228ENST00000617771 OR10A7Q8NGE5 316 aa20.2■□□□□ 0.82
VEGFA-228ENST00000617771 THRSPQ92748 146 aa20.2■□□□□ 0.82
VEGFA-228ENST00000617771 DCLRE1BQ9H816 532 aa20.2■□□□□ 0.82
VEGFA-228ENST00000617771 MAGEA13PA6NCF6 341 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 NPIPB11E5RHQ5 1161 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 ANKRD65E5RJM6 399 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 J3QR06 171 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 CD1AP06126 327 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 CELP19835 753 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 KIAA2026Q5HYC2 2103 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 ATAD3CQ5T2N8 411 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 HIST2H2BDQ6DRA6 164 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 JAGN1Q8N5M9 183 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 RFESDQ8TAC1 157 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 RPEQ96AT9 228 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 OR5M11Q96RB7 305 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 SLC25A33Q9BSK2 321 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 WNT10AQ9GZT5 417 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 ZNF581Q9P0T4 197 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 ERGIC3Q9Y282 383 aa20.19■□□□□ 0.82
VEGFA-228ENST00000617771 A0A1W2PPK0 400 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 TMEM30CPA0ZSE6 113 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 OR2F2O95006 317 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 SSTR5P35346 364 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 LTC4SQ16873 150 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 UTF1Q5T230 341 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 Q6ZS46 218 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 SLC16A12Q6ZSM3 486 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 CDH26Q8IXH8 852 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 NANOGP1Q8N7R0 232 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 TFAP2CQ92754 450 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 TOMM40LQ969M1 308 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 MUL1Q969V5 352 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 DERL3Q96Q80 235 aa20.18■□□□□ 0.82
VEGFA-228ENST00000617771 MRPS28Q9Y2Q9 187 aaKnown RBP20.18■□□□□ 0.82
VEGFA-228ENST00000617771 CD28P10747 220 aa20.17■□□□□ 0.82
VEGFA-228ENST00000617771 GZMHP20718 246 aa20.17■□□□□ 0.82
VEGFA-228ENST00000617771 MAPK3P27361 379 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-228ENST00000617771 DOC2BQ14184 412 aa20.17■□□□□ 0.82
VEGFA-228ENST00000617771 NEK7Q8TDX7 302 aa20.17■□□□□ 0.82
VEGFA-228ENST00000617771 MRPS24Q96EL2 167 aaKnown RBP20.17■□□□□ 0.82
VEGFA-228ENST00000617771 RBM14Q96PK6 669 aaKnown RBP20.17■□□□□ 0.82
VEGFA-228ENST00000617771 SPACA1Q9HBV2 294 aa20.17■□□□□ 0.82
VEGFA-228ENST00000617771 FKBP14Q9NWM8 211 aa20.17■□□□□ 0.82
VEGFA-228ENST00000617771 PSG11Q9UQ72 335 aa20.17■□□□□ 0.82
VEGFA-228ENST00000617771 WNK1Q9H4A3 2382 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 VWFP04275 2813 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 TRAV39A0A0B4J263 110 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 A0A1W2PP11 408 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 OPN1MWP04001 364 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 MAS1P04201 325 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 OPN1MW2P0DN77 364 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 OPN1MW3P0DN78 364 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 EMX1Q04741 257 aaPredicted RBP20.16■□□□□ 0.82
VEGFA-228ENST00000617771 TMEM95Q3KNT9 176 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 AWAT2Q6E213 333 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 GLIPR1L1Q6UWM5 242 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 WIPF2Q8TF74 440 aaPredicted RBP20.16■□□□□ 0.82
VEGFA-228ENST00000617771 LEAP2Q969E1 77 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 OCSTAMPQ9BR26 566 aa20.16■□□□□ 0.82
VEGFA-228ENST00000617771 IGHV3-7P01780 117 aa20.15■□□□□ 0.82
VEGFA-228ENST00000617771 FAM106CPP0CH98 169 aa20.15■□□□□ 0.82
VEGFA-228ENST00000617771 GNG10P50151 68 aa20.15■□□□□ 0.82
VEGFA-228ENST00000617771 MADCAM1Q13477 382 aa20.15■□□□□ 0.82
VEGFA-228ENST00000617771 NSUN5P1Q3KNT7 163 aa20.15■□□□□ 0.82
VEGFA-228ENST00000617771 NDUFA11Q86Y39 141 aa20.15■□□□□ 0.82
VEGFA-228ENST00000617771 NKAIN3Q8N8D7 197 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms