RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 DYRK1AQ13627 763 aa14.43□□□□□ -0.1
TRAPPC3-209ENST00000616395 SLC22A6Q4U2R8 563 aa14.43□□□□□ -0.1
TRAPPC3-209ENST00000616395 FAM201AQ5SY85 155 aa14.43□□□□□ -0.1
TRAPPC3-209ENST00000616395 ZNF841Q6ZN19 808 aa14.43□□□□□ -0.1
TRAPPC3-209ENST00000616395 ZNF573Q86YE8 665 aa14.43□□□□□ -0.1
TRAPPC3-209ENST00000616395 SAXO1Q8IYX7 474 aa14.43□□□□□ -0.1
TRAPPC3-209ENST00000616395 PXT1Q8NFP0 134 aa14.43□□□□□ -0.1
TRAPPC3-209ENST00000616395 COPZ2Q9P299 210 aa14.43□□□□□ -0.1
TRAPPC3-209ENST00000616395 RHBDD3Q9Y3P4 386 aa14.43□□□□□ -0.1
TRAPPC3-209ENST00000616395 LINC00854A0A1B0GVQ3 168 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 FAM240BA0A1B0GVZ2 78 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 GTF2F2P13984 249 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 IZUMO1Q8IYV9 350 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 DTX3Q8N9I9 347 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 SPERTQ8NA61 448 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 SCCPDHQ8NBX0 429 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 OR51T1Q8NGJ9 327 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 LHX4Q969G2 390 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 WWC2-AS2Q96NR7 200 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 SPACA5Q96QH8 159 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 DNAH3Q8TD57 4116 aa14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 EPPK1P58107 5090 aaKnown RBP14.42□□□□□ -0.1
TRAPPC3-209ENST00000616395 IQCF6A8MYZ5 107 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 F5H5P2 479 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 GSTP1P09211 210 aaKnown RBP14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 GNG3P63215 75 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 MRPS15P82914 257 aaKnown RBP14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 SLC35E4Q6ICL7 350 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 PLET1Q6UQ28 207 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 OR8G5Q8NG78 346 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 OR10R2Q8NGX6 335 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 RNF170Q96K19 258 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 MEGF10Q96KG7 1140 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 RHOFQ9HBH0 211 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 RBFOX1Q9NWB1 397 aaKnown RBP14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 IL36GQ9NZH8 169 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 VPREB3Q9UKI3 123 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 HTR3BO95264 441 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 FSTL3O95633 263 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 LPLP06858 475 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 MGMTP16455 207 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 SERPINA2P20848 420 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 RCVRNP35243 200 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 GDNFP39905 211 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 CBX5P45973 191 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 VEGFCP49767 419 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 EFNB2P52799 333 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 RPS27AP62979 156 aaKnown RBP14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 DGCR2P98153 550 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 PNLIPRP3Q17RR3 467 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 PDZD9Q8IXQ8 264 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 OR5D18Q8NGL1 313 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 RAB3CQ96E17 227 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 AUNIPQ9H7T9 357 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 ZNF107Q9UII5 783 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 SIGLEC9Q9Y336 463 aa14.41□□□□□ -0.1
TRAPPC3-209ENST00000616395 PFDN1O60925 122 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 CD3GP09693 182 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 GNG2P59768 71 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 QRFPP83859 136 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 PDZK1IP1Q13113 114 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 RNASE12Q5GAN4 147 aaKnown RBP14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 METTL11BQ5VVY1 283 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 MOGAT3Q86VF5 341 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 OR52I2Q8NH67 350 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 CFHR4Q92496 578 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 TRIM63Q969Q1 353 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 SELENOIQ9C0D9 397 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 SIRPDQ9H106 197 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 TMEM100Q9NV29 134 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 TBC1D24Q9ULP9 559 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 POLDIP2Q9Y2S7 368 aa14.4□□□□□ -0.1
TRAPPC3-209ENST00000616395 BIRC6Q9NR09 4857 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 PQLC2LA1A4F0 135 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 TMEM210A6NLX4 147 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 ZNF732B4DXR9 585 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 ORC5O43913 435 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 LIPFP07098 398 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 PMELP40967 661 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 HOXA4Q00056 320 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 OR8G1Q15617 311 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 CDNFQ49AH0 187 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 OR10K2Q6IF99 312 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 ASCL4Q6XD76 172 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 Q8IYB0 196 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 LYG1Q8N1E2 194 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 OSR2Q8N2R0 312 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 OR13G1Q8NGZ3 307 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 OR5P3Q8WZ94 311 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 NEDD4LQ96PU5 975 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 TM2D1Q9BX74 207 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 C11orf54Q9H0W9 315 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 IFT46Q9NQC8 304 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 MTFP1Q9UDX5 166 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM96BQ9Y3D0 163 aa14.39□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A10PA6NDY2 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 BTBD17A6NE02 478 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A18PA6NE21 464 aa14.38□□□□□ -0.11
TRAPPC3-209ENST00000616395 FAM90A16PA6NEW6 464 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms