RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 RPUSD4Q96CM3 377 aaKnown RBP3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 THOC3Q96J01 351 aaKnown RBP3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 MRGPRX1Q96LB2 322 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 C1orf147Q96MC9 270 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM56Q96MV1 263 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 SLC46A1Q96NT5 459 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 CIB3Q96Q77 187 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 PSMG3Q9BT73 122 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 LMF2Q9BU23 707 aaKnown RBP3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 VAMP8Q9BV40 100 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 SF3B5Q9BWJ5 86 aaKnown RBP3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 TM2D1Q9BX74 207 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 RAB11FIP5Q9BXF6 653 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 TTTY10Q9BZA0 68 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 PARP12Q9H0J9 701 aaKnown RBP3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 S1PR5Q9H228 398 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 SH3BGRL3Q9H299 93 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM9BQ9NQ34 198 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 G6PC2Q9NQR9 355 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 TAS2R4Q9NYW5 299 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 AK3Q9UIJ7 227 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 TBX21Q9UL17 535 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 PADI3Q9ULW8 664 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 RPH3ALQ9UNE2 315 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 B9D1Q9UPM9 204 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 LAMP3Q9UQV4 416 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 LSM5Q9Y4Y9 91 aaKnown RBP3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM56-RWDD3S4R434 201 aa3.5□□□□□ -1.85
HMGB1P50-201ENST00000605814 KIAA2026Q5HYC2 2103 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 IGKV1D-42A0A075B6H8 117 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 IGHV2-26A0A0B4J1V2 119 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 IGHV1-69-2A0A0G2JMI3 117 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 FEZF1A0PJY2 475 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 MYADML2A6NDP7 307 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 SERINC4A6NH21 518 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 PRRT4C9JH25 899 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 DIRC3C9JPN6 131 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 FGF17O60258 216 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR6A2O95222 327 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 NUDT14O95848 222 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 TIMP1P01033 207 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 IGHEP01854 428 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 IGHMP01871 453 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 PCCBP05166 539 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 SLC25A6P12236 298 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 CPMP14384 443 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 GNB3P16520 340 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 CEBPBP17676 345 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 TNFSF4P23510 183 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 MDH2P40926 338 aaKnown RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 REG1BP48304 166 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 COMPP49747 757 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 DCAF7P61962 342 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 RPL23P62829 140 aaKnown RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 GNB2P62879 340 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 MGAT2Q10469 447 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 VGLL4Q14135 290 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 P2RY6Q15077 328 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 RNPS1Q15287 305 aaKnown RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 MMDQ15546 238 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 EXT1Q16394 746 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 PLPPR5Q32ZL2 321 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 ITPRIPL2Q3MIP1 535 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 COX19Q49B96 90 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 SLC22A6Q4U2R8 563 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 PLAC9Q5JTB6 97 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 C9orf135Q5VTT2 229 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 ETFRF1Q6IPR1 90 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 FAM71F2Q6NXP2 309 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF880Q6PDB4 577 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 Q6ZSR3 168 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 C16orf82Q7Z2V1 217 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 DPY19L4Q7Z388 723 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF547Q8IVP9 402 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 CMTM1Q8IZ96 169 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM252Q8N6L7 170 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 TCTEX1D1Q8N7M0 179 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 C12orf76Q8N812 135 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 Q8N976 141 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR10S1Q8NGN2 331 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 WFDC5Q8TCV5 224 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZPLD1Q8TCW7 415 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 NTN5Q8WTR8 489 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 FGF14Q92915 247 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 PINX1Q96BK5 328 aaKnown RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 MSI2Q96DH6 328 aaKnown RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 TM4SF19Q96DZ7 209 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 SPIN2AQ99865 258 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 SPIN2BQ9BPZ2 258 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 ABHD14AQ9BUJ0 271 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 SMIM3Q9BZL3 60 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 ULBP3Q9BZM4 244 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 KCNK15Q9H427 330 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 CST9LQ9H4G1 147 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 NAA60Q9H7X0 242 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 UBE2ZQ9H832 354 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF430Q9H8G1 570 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZMAT3Q9HA38 289 aaKnown RBP3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 LYRM4Q9HD34 91 aa3.49□□□□□ -1.85
HMGB1P50-201ENST00000605814 SLC35D1Q9NTN3 355 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms