RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 SLC35E4Q6ICL7 350 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 OR52W1Q6IF63 320 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 ZNF773Q6PK81 442 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 BAIAP2L2Q6UXY1 529 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 ZNF565Q8N9K5 539 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 DYRK2Q92630 601 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 FCGR1BQ92637 280 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 Q96M66 194 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 GFI1Q99684 422 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 SSX3Q99909 188 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 CST11Q9H112 138 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 SPACA1Q9HBV2 294 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 RCC2Q9P258 522 aaKnown RBP11.24□□□□□ -0.61
UPF1-205ENST00000598209 VPREB3Q9UKI3 123 aa11.24□□□□□ -0.61
UPF1-205ENST00000598209 AK6Q9Y3D8 172 aaKnown RBP11.24□□□□□ -0.61
UPF1-205ENST00000598209 TRAV39A0A0B4J263 110 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 TMEM30CPA0ZSE6 113 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM172BPA6NC97 362 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A10PA6NDY2 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A18PA6NE21 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A16PA6NEW6 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A20PA6NIJ5 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A7PA6NKC0 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A22PA8MWA6 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A12PA8MX19 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A5PA8MXJ8 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A23PA8MXZ1 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 MCRIP1C9JLW8 97 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 H3BUX3 64 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 CCRL2O00421 344 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 SLC22A1O15245 554 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 MPIG6BO95866 241 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A15PP0C7V4 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A13PP0C7W8 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A14PP0C7W9 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 FAM90A24PP0C7X0 464 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 VSIG8P0DPA2 414 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 PSMB9P28065 219 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 LRRC75BQ2VPJ9 315 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 LDLRAD2Q5SZI1 272 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 OR10K2Q6IF99 312 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 RAB12Q6IQ22 244 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 DYNAPQ8N1N2 210 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 ABHD12Q8N2K0 398 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 OR6M1Q8NGM8 313 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 OR5R1Q8NH85 324 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 MRGPRDQ8TDS7 321 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 KCNK15Q9H427 330 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 PLGRKTQ9HBL7 147 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 CALYQ9NYX4 217 aa11.23□□□□□ -0.61
UPF1-205ENST00000598209 TRDV1A0A1B0GX56 115 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 SLC17A2O00624 439 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 IL1AP01583 271 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 FUT3P21217 361 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 NFYBP25208 207 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 CD34P28906 385 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 RPL15P61313 204 aaKnown RBP11.22□□□□□ -0.61
UPF1-205ENST00000598209 RBM39Q14498 530 aaKnown RBP11.22□□□□□ -0.61
UPF1-205ENST00000598209 AANATQ16613 207 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 KCTD21Q4G0X4 260 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 MINOS1Q5TGZ0 78 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 SIGIRRQ6IA17 410 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 CD200R1LQ6Q8B3 271 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 GDPGP1Q6ZNW5 385 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 RTN4RL2Q86UN3 420 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 KCNG3Q8TAE7 436 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 MALSU1Q96EH3 234 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 KIRREL1Q96J84 757 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 TMEM59Q9BXS4 323 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 ZNF286AQ9HBT8 521 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 ETAA1Q9NY74 926 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 IDI2-AS1Q9NZ38 188 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 C1RLQ9NZP8 487 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 PEX16Q9Y5Y5 336 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 MINOS1-NBL1R4GNA1 71 aa11.22□□□□□ -0.61
UPF1-205ENST00000598209 TMEM14DPA8MWL7 114 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 NPIPB11E5RHQ5 1161 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 H3BUI4 141 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 AIPO00170 330 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 PDCD6O75340 191 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 BPNT1O95861 308 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 MT-ND4P03905 459 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 SSTR5P35346 364 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 QRFPP83859 136 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 RELBQ01201 579 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 UNC119Q13432 240 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 P2RY14Q15391 338 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 FAM189A2Q15884 450 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 SSX2Q16385 188 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 PLA1AQ53H76 456 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 ZNF497Q6ZNH5 498 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 C3orf56Q8N813 242 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 OR4P4Q8NGL7 312 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 RFESDQ8TAC1 157 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 NDNFQ8TB73 568 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 ZNF596Q8TC21 504 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 CCDC107Q8WV48 283 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 LINC00574Q9H8X3 128 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 V9GY05 133 aa11.21□□□□□ -0.61
UPF1-205ENST00000598209 A0A087X0M5 115 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms