RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 Q8IYB0 196 aa8.38□□□□□ -1.07
LIG1-213ENST00000596672 SAXO1Q8IYX7 474 aa8.38□□□□□ -1.07
LIG1-213ENST00000596672 ABHD12Q8N2K0 398 aa8.38□□□□□ -1.07
LIG1-213ENST00000596672 OR4C13Q8NGP0 309 aa8.38□□□□□ -1.07
LIG1-213ENST00000596672 OR13A1Q8NGR1 328 aa8.38□□□□□ -1.07
LIG1-213ENST00000596672 LEAP2Q969E1 77 aa8.38□□□□□ -1.07
LIG1-213ENST00000596672 PPP1R14BQ96C90 147 aa8.38□□□□□ -1.07
LIG1-213ENST00000596672 CLEC7AQ9BXN2 247 aa8.38□□□□□ -1.07
LIG1-213ENST00000596672 EXOSC4Q9NPD3 245 aaKnown RBP8.38□□□□□ -1.07
LIG1-213ENST00000596672 UBE2J1Q9Y385 318 aaPredicted RBP8.38□□□□□ -1.07
LIG1-213ENST00000596672 A0A1W2PPH5 198 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 HSPB6O14558 160 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 SH2D1BO14796 132 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 OGG1O15527 345 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 CDRT1O95170 752 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 CSF1P09603 554 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 TMEM225BP0DP42 221 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 GADD45AP24522 165 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 TMBIM6P55061 237 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 LSM3P62310 102 aaKnown RBP8.37□□□□□ -1.07
LIG1-213ENST00000596672 SAMD5Q5TGI4 173 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 RSBN1Q5VWQ0 802 aaPredicted RBP8.37□□□□□ -1.07
LIG1-213ENST00000596672 ELP2Q6IA86 826 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 SLC16A12Q6ZSM3 486 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 C5orf24Q7Z6I8 188 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 ANKRD13BQ86YJ7 626 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 ZFP41Q8N8Y5 198 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 OR51T1Q8NGJ9 327 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 OR52N1Q8NH53 320 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 OR5AK2Q8NH90 309 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 OR2T6Q8NHC8 308 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 CITED2Q99967 270 aaPredicted RBP8.37□□□□□ -1.07
LIG1-213ENST00000596672 NPFFR1Q9GZQ6 430 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 MMP28Q9H239 520 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 INPP5EQ9NRR6 644 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 KIF25Q9UIL4 384 aa8.37□□□□□ -1.07
LIG1-213ENST00000596672 KMT2CQ8NEZ4 4911 aaKnown RBP8.36□□□□□ -1.07
LIG1-213ENST00000596672 TRAV8-7A0A075B6U6 113 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 A0A087X0M5 115 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 TRBV5-5A0A0J9YX44 114 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 PNMA8CA0A1B0GUJ8 204 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 A0A1B0GX30 115 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 hCG_1809904A0A1W2PP81 198 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 A0A1W2PPE2 198 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 A0A1W2PR64 198 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 A0A1W2PRV1 198 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 TMEM212A6NML5 194 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 H3BMQ9 156 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 DEGS1O15121 323 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 PIN1P1O15428 100 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 CSN2P05814 226 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 ZNF44P15621 663 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 IGFBP3P17936 291 aaPredicted RBP8.36□□□□□ -1.07
LIG1-213ENST00000596672 BDH1Q02338 343 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 MLLT11Q13015 90 aaPredicted RBP8.36□□□□□ -1.07
LIG1-213ENST00000596672 DCTN2Q13561 401 aaKnown RBP8.36□□□□□ -1.07
LIG1-213ENST00000596672 SSX1Q16384 188 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 C2orf68Q2NKX9 166 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 KRBOX4Q5JUW0 171 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 KPRPQ5T749 579 aaPredicted RBP8.36□□□□□ -1.07
LIG1-213ENST00000596672 MINOS1Q5TGZ0 78 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 LIPKQ5VXJ0 399 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 LIAT1Q6ZQX7 453 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 LYPD6Q86Y78 171 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 SERPINA12Q8IW75 414 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 PXT1Q8NFP0 134 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 RFESDQ8TAC1 157 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 FOXRED1Q96CU9 486 aaPredicted RBP8.36□□□□□ -1.07
LIG1-213ENST00000596672 KIRREL1Q96J84 757 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 PGLYRP3Q96LB9 341 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 OR51E2Q9H255 320 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 LINC00574Q9H8X3 128 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 NEK6Q9HC98 313 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 BABAM2Q9NXR7 383 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 TAS2R3Q9NYW6 316 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 DPM3Q9P2X0 92 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 DHDHQ9UQ10 334 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 MINOS1-NBL1R4GNA1 71 aa8.36□□□□□ -1.07
LIG1-213ENST00000596672 LOC100506127A0A0U1RQW1 187 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 KBTBD11-OT1A0A1B0GTJ5 212 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 NPIPB11E5RHQ5 1161 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 BUB1B-PAK6H3BSN5 160 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 CCRL2O00421 344 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 AIREO43918 545 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 CYB5AP00167 134 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 OPN1MWP04001 364 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 HCKP08631 526 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 OPN1MW2P0DN77 364 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 OPN1MW3P0DN78 364 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 CPEP16870 476 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 HTR1DP28221 377 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 GBX2P52951 348 aaPredicted RBP8.35□□□□□ -1.07
LIG1-213ENST00000596672 VBP1P61758 197 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 CTF1Q16619 201 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 HLA-DRB5Q30154 266 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 NSUN5P1Q3KNT7 163 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 OXLD1Q5BKU9 147 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 TPTE2P1Q5T6R2 138 aa8.35□□□□□ -1.07
LIG1-213ENST00000596672 DMKNQ6E0U4 476 aaPredicted RBP8.35□□□□□ -1.07
LIG1-213ENST00000596672 Q6ZTK2 550 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms