RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 C1QL4Q86Z23 238 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 OSR2Q8N2R0 312 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 SUMF2Q8NBJ7 301 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 OR5M11Q96RB7 305 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 DPCDQ9BVM2 203 aaPredicted RBP10.44□□□□□ -0.74
LIG1-212ENST00000596549 PRSS22Q9GZN4 317 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 MMP28Q9H239 520 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 NCOR1P1Q9H4R4 102 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 IFT22Q9H7X7 185 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 LINC00574Q9H8X3 128 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 FKBP14Q9NWM8 211 aa10.44□□□□□ -0.74
LIG1-212ENST00000596549 EFCAB10A6NFE3 127 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 LEUTXA8MZ59 168 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 PIN1P1O15428 100 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 OR7C1O76099 320 aaPredicted RBP10.43□□□□□ -0.74
LIG1-212ENST00000596549 AMY1AP04745 511 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 AMY2AP04746 511 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 NFYBP25208 207 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 KCNJ3P48549 501 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 WNT4P56705 351 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 MED21Q13503 144 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 DIAPH2-AS1Q14236 149 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 RBM39Q14498 530 aaKnown RBP10.43□□□□□ -0.74
LIG1-212ENST00000596549 LTC4SQ16873 150 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 LYPD6Q86Y78 171 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 OR9G1Q8NH87 305 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 DERL3Q96Q80 235 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 OCSTAMPQ9BR26 566 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 SLC25A33Q9BSK2 321 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 METTL9Q9H1A3 318 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 LIN7BQ9HAP6 207 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 PLCXD1Q9NUJ7 323 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 IDI2-AS1Q9NZ38 188 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 ING4Q9UNL4 249 aa10.43□□□□□ -0.74
LIG1-212ENST00000596549 A0A1W2PPI3 338 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 A0A1W2PPK0 400 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 SH2D7A6NKC9 451 aaPredicted RBP10.42□□□□□ -0.74
LIG1-212ENST00000596549 MYL12BO14950 172 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 CSTBP04080 98 aaKnown RBP10.42□□□□□ -0.74
LIG1-212ENST00000596549 VDAC2P45880 294 aaPredicted RBP10.42□□□□□ -0.74
LIG1-212ENST00000596549 GNG10P50151 68 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 TAS2R43P59537 309 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 MPV17LQ2QL34 196 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 FAM53AQ6NSI3 398 aaPredicted RBP10.42□□□□□ -0.74
LIG1-212ENST00000596549 C16orf82Q7Z2V1 217 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 LINC00596Q86U02 117 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 BPIFB6Q8NFQ5 453 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 MUL1Q969V5 352 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 CITED2Q99967 270 aaPredicted RBP10.42□□□□□ -0.74
LIG1-212ENST00000596549 BARHL1Q9BZE3 327 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 CHCHD3Q9NX63 227 aaKnown RBP10.42□□□□□ -0.74
LIG1-212ENST00000596549 RCC2Q9P258 522 aaKnown RBP10.42□□□□□ -0.74
LIG1-212ENST00000596549 NKX1-2Q9UD57 310 aaPredicted RBP10.42□□□□□ -0.74
LIG1-212ENST00000596549 PSG11Q9UQ72 335 aa10.42□□□□□ -0.74
LIG1-212ENST00000596549 G3V4G9 280 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 C15orf65H3BRN8 121 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 J3QR06 171 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 TOR1AO14656 332 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 OR2F2O95006 317 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 OPN1MWP04001 364 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 OPN1MW2P0DN77 364 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 OPN1MW3P0DN78 364 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 CELP19835 753 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 BRS3P32247 399 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 CEACAM3P40198 252 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 INSL4Q14641 139 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 SLC22A6Q4U2R8 563 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 STX19Q8N4C7 294 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 NANOGP1Q8N7R0 232 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 DTX3Q8N9I9 347 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 ZNF565Q8N9K5 539 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 RFESDQ8TAC1 157 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 UBALD1Q8TB05 177 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 SGCDQ92629 289 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 TFAP2CQ92754 450 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 TOMM40LQ969M1 308 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 RBM14Q96PK6 669 aaKnown RBP10.41□□□□□ -0.74
LIG1-212ENST00000596549 PAK1IP1Q9NWT1 392 aaPredicted RBP10.41□□□□□ -0.74
LIG1-212ENST00000596549 MRPS28Q9Y2Q9 187 aaKnown RBP10.41□□□□□ -0.74
LIG1-212ENST00000596549 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
LIG1-212ENST00000596549 PRKDCP78527 4128 aaKnown RBP10.4□□□□□ -0.74
LIG1-212ENST00000596549 TMEM30CPA0ZSE6 113 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 FAM90A18PA6NE21 464 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 FAM90A16PA6NEW6 464 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 FAM90A20PA6NIJ5 464 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 FAM90A9PA6NNJ1 464 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 FAM90A12PA8MX19 464 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 FAM90A5PA8MXJ8 464 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 OOSP1A8MZH6 123 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 ZNF780AO75290 641 aaPredicted RBP10.4□□□□□ -0.74
LIG1-212ENST00000596549 MAS1P04201 325 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 CD1AP06126 327 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 FAM90A15PP0C7V4 464 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 FAM90A13PP0C7W8 464 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 FAM90A14PP0C7W9 464 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 FAM90A24PP0C7X0 464 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 GTF2F2P13984 249 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 PRRX1P54821 245 aa10.4□□□□□ -0.74
LIG1-212ENST00000596549 ABCA11PQ4W5N1 156 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms