RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 GRK1Q15835 563 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 TRIM16LQ309B1 348 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 CHRFAM7AQ494W8 412 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 ACTBL2Q562R1 376 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 ATPAF1Q5TC12 328 aaPredicted RBP10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 SLC35E4Q6ICL7 350 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 OR52W1Q6IF63 320 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 ZNF788Q6ZQV5 615 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 GDPD3Q7L5L3 318 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 MINDY2Q8NBR6 621 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 ENKURQ8TC29 256 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 MAFIPQ8WZ33 124 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 SDSLQ96GA7 329 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 TIMD4Q96H15 378 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 DNTTIP1Q9H147 329 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 ZNF286AQ9HBT8 521 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 Q9N2K0 584 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 MCUBQ9NWR8 336 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 ZNF222Q9UK12 451 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 TRAPPC2LQ9UL33 140 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 ANAPC10Q9UM13 185 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 TMEM30CPA0ZSE6 113 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 FUOMA2VDF0 154 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 DISC1C4P0D8 188 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 K7N7A8 449 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 MGST3O14880 152 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 PPIHO43447 177 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 LY6HO94772 140 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 PTTG1O95997 202 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 NAPSAO96009 420 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 PMP2P02689 132 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 TK1P04183 234 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 IFNA6P05013 189 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 OR3A1P47881 315 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 TMEM33P57088 247 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 TAS2R46P59540 309 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 BTG1P62324 171 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 AESQ08117 197 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 MEF2DQ14814 521 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 ATXN7L3Q14CW9 347 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 CARTPTQ16568 116 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 SRSF7Q16629 238 aaKnown RBP eCLIP10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 RNASE10Q5GAN6 216 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 KRBOX4Q5JUW0 171 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 ZNF782Q6ZMW2 699 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 ZNF497Q6ZNH5 498 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 C17orf107Q6ZR85 190 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 SLC36A1Q7Z2H8 476 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 CENPSQ8N2Z9 138 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 ZNRF1Q8ND25 227 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 OR5H2Q8NGV7 314 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 PLPPR1Q8TBJ4 325 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 MRPL30Q8TCC3 161 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 CCDC107Q8WV48 283 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 GAFA1Q96PS6 74 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 SHARPINQ9H0F6 387 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 FAM234AQ9H0X4 552 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 CHODLQ9H9P2 273 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 MAB21L2Q9Y586 359 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 DSCAMO60469 2012 aa10.89□□□□□ -0.67
SHKBP1-209ENST00000595803 RAI1Q7Z5J4 1906 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 TRBV6-6A0A0A6YYG2 114 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 TRDCB7Z8K6 153 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 M0QYG6 137 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 SIGLEC5O15389 551 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 ADAM20O43506 726 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 NDUFB3O43676 98 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 ZNF737O75373 536 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 RP2O75695 350 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 FSTL3O95633 263 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 LY6G6DO95868 133 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 CD74P04233 296 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 TBPP20226 339 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 ARPC4P59998 168 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 IL13RA1P78552 427 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 ZMYND11Q15326 602 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 NRARPQ7Z6K4 114 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 MUC20Q8N307 709 aaPredicted RBP10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 TMEM185AQ8NFB2 350 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 OR5AP2Q8NGF4 316 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 OR4C16Q8NGL9 310 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 CHPT1Q8WUD6 406 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 TMEM246Q9BRR3 403 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 DPAGT1Q9H3H5 408 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 KCNIP1Q9NZI2 227 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 ANXA10Q9UJ72 324 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 MGAT4AQ9UM21 535 aa10.88□□□□□ -0.67
SHKBP1-209ENST00000595803 TLN2Q9Y4G6 2542 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 MEIKINA0A087WXM9 373 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 KIR2DS1A0A191URI9 304 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 TNFRSF13BO14836 293 aaPredicted RBP10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 TMPRSS2O15393 492 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 NDUFS7O75251 213 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 AMY2AP04746 511 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 CSN2P05814 226 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 GSTT2P0CG29 244 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 GIFP27352 417 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 HRH1P35367 487 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 KIR2DS4P43632 304 aa10.87□□□□□ -0.67
SHKBP1-209ENST00000595803 RFX2P48378 723 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms