RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 SUMF2Q8NBJ7 301 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 OR13C5Q8NGS8 318 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 GPR148Q8TDV2 347 aa13.55□□□□□ -0.24
CCDC9-202ENST00000595659 CPNE2Q96FN4 548 aaPredicted RBP13.55□□□□□ -0.24
CCDC9-202ENST00000595659 FGF20Q9NP95 211 aaPredicted RBP13.55□□□□□ -0.24
CCDC9-202ENST00000595659 IL1AP01583 271 aa13.54□□□□□ -0.24
CCDC9-202ENST00000595659 PF4P02776 101 aa13.54□□□□□ -0.24
CCDC9-202ENST00000595659 HES1Q14469 280 aa13.54□□□□□ -0.24
CCDC9-202ENST00000595659 RPL22L1Q6P5R6 122 aaKnown RBP13.54□□□□□ -0.24
CCDC9-202ENST00000595659 ZNF329Q86UD4 541 aa13.54□□□□□ -0.24
CCDC9-202ENST00000595659 C10orf67Q8IYJ2 551 aa13.54□□□□□ -0.24
CCDC9-202ENST00000595659 UBALD1Q8TB05 177 aa13.54□□□□□ -0.24
CCDC9-202ENST00000595659 TMEM106AQ96A25 262 aa13.54□□□□□ -0.24
CCDC9-202ENST00000595659 DPCDQ9BVM2 203 aaPredicted RBP13.54□□□□□ -0.24
CCDC9-202ENST00000595659 CLEC2DQ9UHP7 191 aa13.54□□□□□ -0.24
CCDC9-202ENST00000595659 ST3GAL6Q9Y274 331 aa13.54□□□□□ -0.24
CCDC9-202ENST00000595659 TSSC4Q9Y5U2 329 aaPredicted RBP13.54□□□□□ -0.24
CCDC9-202ENST00000595659 OOSP1A8MZH6 123 aa13.53□□□□□ -0.24
CCDC9-202ENST00000595659 OR7C1O76099 320 aaPredicted RBP13.53□□□□□ -0.24
CCDC9-202ENST00000595659 CD2P06729 351 aa13.53□□□□□ -0.24
CCDC9-202ENST00000595659 LOXL3P58215 753 aa13.53□□□□□ -0.24
CCDC9-202ENST00000595659 DDI2Q5TDH0 399 aa13.53□□□□□ -0.24
CCDC9-202ENST00000595659 ASCL4Q6XD76 172 aa13.53□□□□□ -0.24
CCDC9-202ENST00000595659 ZNF555Q8NEP9 628 aa13.53□□□□□ -0.24
CCDC9-202ENST00000595659 WFDC9Q8NEX5 89 aa13.53□□□□□ -0.24
CCDC9-202ENST00000595659 OR4X2Q8NGF9 303 aa13.53□□□□□ -0.24
CCDC9-202ENST00000595659 MOB4Q9Y3A3 225 aa13.53□□□□□ -0.24
CCDC9-202ENST00000595659 AMMECR1Q9Y4X0 333 aaPredicted RBP13.53□□□□□ -0.24
CCDC9-202ENST00000595659 HSPE1-MOB4S4R3N1 261 aa13.53□□□□□ -0.24
CCDC9-202ENST00000595659 DSCAML1Q8TD84 2053 aa13.52□□□□□ -0.24
CCDC9-202ENST00000595659 A0A1W2PP11 408 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 A0A1W2PPI3 338 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM90A18PA6NE21 464 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM90A16PA6NEW6 464 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM90A20PA6NIJ5 464 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM90A9PA6NNJ1 464 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM90A12PA8MX19 464 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM90A5PA8MXJ8 464 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 NPIPB11E5RHQ5 1161 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 GEMIN2O14893 280 aaKnown RBP13.52□□□□□ -0.25
CCDC9-202ENST00000595659 LALBAP00709 142 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM90A15PP0C7V4 464 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM90A13PP0C7W8 464 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM90A14PP0C7W9 464 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM90A24PP0C7X0 464 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 TMEM11P17152 192 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 SERPINA2P20848 420 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 ZNF93P35789 620 aaPredicted RBP13.52□□□□□ -0.25
CCDC9-202ENST00000595659 REG1BP48304 166 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 PPP3R1P63098 170 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 MADCAM1Q13477 382 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 CCDC58Q4VC31 144 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 FAM53AQ6NSI3 398 aaPredicted RBP13.52□□□□□ -0.25
CCDC9-202ENST00000595659 TMPRSS11AQ6ZMR5 421 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 OSR2Q8N2R0 312 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 ZFP41Q8N8Y5 198 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 Q8NFD4 153 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 OR10X1Q8NGY0 326 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 OR52N1Q8NH53 320 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 CCDC107Q8WV48 283 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 NOL4LQ96MY1 436 aaPredicted RBP13.52□□□□□ -0.25
CCDC9-202ENST00000595659 METTL9Q9H1A3 318 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 NCOR1P1Q9H4R4 102 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 LINC00574Q9H8X3 128 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 TMEM138Q9NPI0 162 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 SMPD3Q9NY59 655 aaPredicted RBP13.52□□□□□ -0.25
CCDC9-202ENST00000595659 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.52□□□□□ -0.25
CCDC9-202ENST00000595659 LINC00527Q9UJ94 153 aa13.52□□□□□ -0.25
CCDC9-202ENST00000595659 PLXNB1O43157 2135 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 IGHV3-72A0A0B4J1Y9 119 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 A0A1W2PPK0 400 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 M0QZK8 103 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 OGG1O15527 345 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 MPIG6BO95866 241 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 CSTBP04080 98 aaKnown RBP13.51□□□□□ -0.25
CCDC9-202ENST00000595659 DCKP27707 260 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 BDKRB2P30411 391 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 RBM11P57052 281 aaKnown RBP13.51□□□□□ -0.25
CCDC9-202ENST00000595659 LRRC36Q1X8D7 754 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 ATAD3CQ5T2N8 411 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 THNSL2Q86YJ6 484 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 HAVCR2Q8TDQ0 301 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 GHSRQ92847 366 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 BABAM2Q9NXR7 383 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 ZNF281Q9Y2X9 895 aa13.51□□□□□ -0.25
CCDC9-202ENST00000595659 PSMB11A5LHX3 300 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 MAGEA13PA6NCF6 341 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 IGKV1D-33P01593 117 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 IGKV1-33P01594 117 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 KCNJ3P48549 501 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 SLC22A6Q4U2R8 563 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 MOB3BQ86TA1 216 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 NEK7Q8TDX7 302 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 CYGBQ8WWM9 190 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 RBMXL1Q96E39 390 aaKnown RBP13.5□□□□□ -0.25
CCDC9-202ENST00000595659 S100A13Q99584 98 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 PCDHB16Q9NRJ7 776 aa13.5□□□□□ -0.25
CCDC9-202ENST00000595659 IGHV3-43A0A0B4J1X8 118 aa13.49□□□□□ -0.25
CCDC9-202ENST00000595659 TMEM30CPA0ZSE6 113 aa13.49□□□□□ -0.25
CCDC9-202ENST00000595659 IGHV3-43DP0DP04 118 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms