RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SAXO1Q8IYX7 474 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 SPICQ8N5J4 248 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 OR56B2PQ8NGI1 322 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 OR5D18Q8NGL1 313 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 RAB1CQ92928 201 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 DMRTB1Q96MA1 342 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 PRRT1Q99946 306 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 PECRQ9BY49 303 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 TINAGL1Q9GZM7 467 aaPredicted RBP10.67□□□□□ -0.7
SCAF1-202ENST00000595242 NKIRAS2Q9NYR9 191 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 SCP2D1Q9UJQ7 156 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 HSF4Q9ULV5 492 aa10.67□□□□□ -0.7
SCAF1-202ENST00000595242 SOX21Q9Y651 276 aaPredicted RBP10.67□□□□□ -0.7
SCAF1-202ENST00000595242 PQLC2LA1A4F0 135 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 G3V4G9 280 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 CREBL2O60519 120 aaPredicted RBP10.66□□□□□ -0.7
SCAF1-202ENST00000595242 FOXH1O75593 365 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 NGFP01138 241 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 AMY2AP04746 511 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 VSIG10L2P0DP72 767 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 SERPINA2P20848 420 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 NKX2-5P52952 324 aaPredicted RBP10.66□□□□□ -0.7
SCAF1-202ENST00000595242 RELBQ01201 579 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 HLXQ14774 488 aaPredicted RBP10.66□□□□□ -0.7
SCAF1-202ENST00000595242 HFEQ30201 348 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 RNASE10Q5GAN6 216 aaKnown RBP10.66□□□□□ -0.7
SCAF1-202ENST00000595242 PLCXD3Q63HM9 321 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 MOB3CQ70IA8 216 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 REC114Q7Z4M0 266 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 OR51T1Q8NGJ9 327 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 OR13C8Q8NGS7 320 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 SNAPC3Q92966 411 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 ARHGAP5-AS1Q96IT6 56 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 IFT46Q9NQC8 304 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 PCDHB16Q9NRJ7 776 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 TAAR3PQ9P1P4 343 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 STARD10Q9Y365 291 aa10.66□□□□□ -0.7
SCAF1-202ENST00000595242 IGKV1-12A0A0C4DH73 117 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM230AA0A1W2PPH8 454 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A10PA6NDY2 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A18PA6NE21 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A16PA6NEW6 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A20PA6NIJ5 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A8PA6NJQ4 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A7PA6NKC0 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 CEACAM18A8MTB9 384 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A22PA8MWA6 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A12PA8MX19 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A5PA8MXJ8 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A23PA8MXZ1 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 TRAPPC2LH3BP13 241 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 M0QYG6 137 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 RGS13O14921 159 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 HOXA3O43365 443 aaPredicted RBP10.65□□□□□ -0.7
SCAF1-202ENST00000595242 IGKV1D-12P01611 117 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A15PP0C7V4 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A13PP0C7W8 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A14PP0C7W9 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FAM90A24PP0C7X0 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 TMEM225BP0DP42 221 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 ANXA7P20073 488 aaKnown RBP10.65□□□□□ -0.7
SCAF1-202ENST00000595242 PMELP40967 661 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 PDZK1IP1Q13113 114 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 PRDX4Q13162 271 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 TBC1D28Q2M2D7 210 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 KPRPQ5T749 579 aaPredicted RBP10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FBXW12Q6X9E4 464 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 IDO2Q6ZQW0 420 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 RTN4RL2Q86UN3 420 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 HOGA1Q86XE5 327 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 FTMTQ8N4E7 242 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 ARRDC1Q8N5I2 433 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 GVQW1Q8N7I0 195 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 SLC30A7Q8NEW0 376 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 OR5L1Q8NGL2 311 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 OR10K1Q8NGX5 313 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 OR8S1Q8NH09 359 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 CCDC107Q8WV48 283 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 HPSE2Q8WWQ2 592 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 PIGCQ92535 297 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 SEC22CQ9BRL7 303 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 POFUT1Q9H488 388 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 DECR2Q9NUI1 292 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 C1RLQ9NZP8 487 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 GPR160Q9UJ42 338 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 NOTCH3Q9UM47 2321 aa10.65□□□□□ -0.7
SCAF1-202ENST00000595242 IGHV3OR16-10A0A075B7F0 116 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 MDFIC2A0A1B0GVS7 189 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 TMEM82A0PJX8 343 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 ZNF850A8MQ14 1090 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 TPD52L2O43399 206 aaKnown RBP10.64□□□□□ -0.71
SCAF1-202ENST00000595242 NDUFA7O95182 113 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 CSTBP04080 98 aaKnown RBP10.64□□□□□ -0.71
SCAF1-202ENST00000595242 IGHV4-38-2P0DP08 117 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 CCL2P13500 99 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 CXCL3P19876 107 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 BLVRBP30043 206 aaPredicted RBP10.64□□□□□ -0.71
SCAF1-202ENST00000595242 PRSS12P56730 875 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 RSU1Q15404 277 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 CEACAM21Q3KPI0 293 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms