RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 PPP1CBP62140 327 aa14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 RUNX1Q01196 453 aa14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 ZNF705AQ6ZN79 300 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 CYC1P08574 325 aa14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 OR3A1P47881 315 aa14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 PLAURQ03405 335 aa14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 ZNF90Q03938 601 aa14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 MRGPRFQ96AM1 343 aa14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 SH3BGRL3Q9H299 93 aa14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 DNASE2O00115 360 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 S1PR3Q99500 378 aa14.86□□□□□ -0.03
SMARCA4-215ENST00000590574 IGHV3-43A0A0B4J1X8 118 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 IGHV3-43DP0DP04 118 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 MOB3AQ96BX8 217 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 LOC390937A0A1W2PQ73 354 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 ZNF320A2RRD8 509 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 SCTP09683 121 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 GALR1P47211 349 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 PAQR4Q8N4S7 273 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 DEFB108BQ8NET1 73 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 TMEM54Q969K7 222 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 TMEM222Q9H0R3 208 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 HSF4Q9ULV5 492 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 PROCRQ9UNN8 238 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 R4GN57 208 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 LYZL6O75951 148 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 EIF4E3Q8N5X7 224 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 EDARADDQ8WWZ3 215 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 PLXND1Q9Y4D7 1925 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 ACTL6AO96019 429 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 HIKESHIQ53FT3 197 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 ZNF766Q5HY98 468 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 DHRS11Q6UWP2 260 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 BTNL3Q6UXE8 466 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 GPHA2Q96T91 129 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 TUBG2Q9NRH3 451 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 PSG11Q9UQ72 335 aa14.85□□□□□ -0.03
SMARCA4-215ENST00000590574 HEXAP06865 529 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 PMELP40967 661 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 TMEM187Q14656 261 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 OR5A2Q8NGI9 324 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 M0R1B8 84 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 PHOX2AO14813 284 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 FHITP49789 147 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 PCOLCEQ15113 449 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 Q3ZCU0 254 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 ASPHD2Q6ICH7 369 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 ZNF66Q6ZN08 573 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 MRGPRDQ8TDS7 321 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 CACFD1Q9UGQ2 172 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 ARHGEF17Q96PE2 2063 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 SCN8AQ9UQD0 1980 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 ENSAO43768 121 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 CYTIPO60759 359 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 C10orf128Q5T292 105 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 OR10G4Q8NGN3 311 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 OR10G9Q8NGN4 311 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 OR10G7Q8NGN6 311 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 TMEM9BQ9NQ34 198 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 LTBRP36941 435 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 DHRS7BQ6IAN0 325 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 TMEM252Q8N6L7 170 aa14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 RBMXL3Q8N7X1 1067 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-215ENST00000590574 PMS2P1A4D2B8 440 aa14.83□□□□□ -0.03
SMARCA4-215ENST00000590574 RPS2P15880 293 aaKnown RBP14.83□□□□□ -0.03
SMARCA4-215ENST00000590574 NDUFB7P17568 137 aa14.83□□□□□ -0.03
SMARCA4-215ENST00000590574 H1FXQ92522 213 aaKnown RBP14.83□□□□□ -0.03
SMARCA4-215ENST00000590574 RYDENQ9NUL5 291 aaKnown RBP14.83□□□□□ -0.03
SMARCA4-215ENST00000590574 HS3ST3B1Q9Y662 390 aa14.83□□□□□ -0.03
SMARCA4-215ENST00000590574 V9GYS6 101 aa14.83□□□□□ -0.03
SMARCA4-215ENST00000590574 BMP5P22003 454 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 CXorf66Q5JRM2 361 aaPredicted RBP14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 OR1K1Q8NGR3 316 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 TMEM37Q8WXS4 190 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 DNASE2BQ8WZ79 361 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 MESP1Q9BRJ9 268 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 RNF126Q9BV68 326 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 CDIPTO14735 213 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 OR2M7Q8NG81 312 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 OR4A4PQ8NGN8 299 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 SARAFQ96BY9 339 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 REG4Q9BYZ8 158 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 A0A1B0GU03 582 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 M0R1X1 148 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 FGF5P12034 268 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 COX6A1P12074 109 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 GABRA4P48169 554 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 TMEM18Q96B42 140 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 DYNLRB1Q9NP97 96 aa14.83□□□□□ -0.04
SMARCA4-215ENST00000590574 CA11O75493 328 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 EIF3IQ13347 325 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 CHCHD2Q9Y6H1 151 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 FCGR3BO75015 233 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 PNRC1Q12796 327 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 BTNL8Q6UX41 500 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 CYB561D1Q8N8Q1 229 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 THBS3P49746 956 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 CEACAM21Q3KPI0 293 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 RARRES2Q99969 163 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 MRPL13Q9BYD1 178 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms