RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 NAPSAO96009 420 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 HLA-DQB1P01920 261 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 MELTFP08582 738 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 PPIAL4GP0DN37 164 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 PTHLHP12272 177 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 PITPNAQ00169 270 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 PAX2Q02962 417 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 TMEM200BQ69YZ2 307 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 CYB5R2Q6BCY4 276 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 TRAPPC6BQ86SZ2 158 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 SNX29P2Q8IUI4 249 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 OR4K15Q8NH41 348 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 C15orf40Q8WUR7 153 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 CCDC107Q8WV48 283 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 MSI2Q96DH6 328 aaKnown RBP12.53□□□□□ -0.4
ATG4D-211ENST00000589753 HDHD3Q9BSH5 251 aaPredicted RBP12.53□□□□□ -0.4
ATG4D-211ENST00000589753 MMP26Q9NRE1 261 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 RABL2AQ9UBK7 228 aaPredicted RBP12.53□□□□□ -0.4
ATG4D-211ENST00000589753 TRAPPC2LQ9UL33 140 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 RABL2BQ9UNT1 228 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 LINC00312Q9Y6C7 94 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 CSMD1Q96PZ7 3565 aa12.53□□□□□ -0.4
ATG4D-211ENST00000589753 TRAV39A0A0B4J263 110 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 TRAV20A0A0B4J274 112 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 KIR2DS1A0A191URI9 304 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 A0A1W2PPH5 198 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 MEX3AA1L020 520 aaKnown RBP12.52□□□□□ -0.41
ATG4D-211ENST00000589753 POM121CA8CG34 1229 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 LIPFP07098 398 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 GLP1RP43220 463 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 IL18Q14116 193 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF273Q14593 569 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 FAM131AQ6UXB0 335 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 BTNL3Q6UXE8 466 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 TCF23Q7RTU1 214 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 CCDC190Q86UF4 302 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF565Q8N9K5 539 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 OR13A1Q8NGR1 328 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 SETD6Q8TBK2 473 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 NUDCD2Q8WVJ2 157 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 CORO2AQ92828 525 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 DACT3Q96B18 629 aaPredicted RBP12.52□□□□□ -0.41
ATG4D-211ENST00000589753 TMEM186Q96B77 213 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 C18orf12Q96KH6 178 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 DMRTB1Q96MA1 342 aa12.52□□□□□ -0.41
ATG4D-211ENST00000589753 UBE2J1Q9Y385 318 aaPredicted RBP12.52□□□□□ -0.41
ATG4D-211ENST00000589753 TRBV6-6A0A0A6YYG2 114 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 A0A0G2JMP0 313 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 A0A0X1KG70 313 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 TGFAP01135 160 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 FCGR3AP08637 254 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 PRSS3P35030 304 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 DVL1P1P54792 670 aaPredicted RBP12.51□□□□□ -0.41
ATG4D-211ENST00000589753 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 C6orf183Q5T699 404 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 PYHIN1Q6K0P9 492 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 LINC00299Q6ZSB3 139 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 MOB1BQ7L9L4 216 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 GLCCI1Q86VQ1 547 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 OR4M2Q8NGB6 313 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 MRGPRDQ8TDS7 321 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 GCDHQ92947 438 aaPredicted RBP12.51□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF714Q96N38 554 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 ABHD1Q96SE0 405 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 SOSTQ9BQB4 213 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 MBNL3Q9NUK0 354 aaKnown RBP12.51□□□□□ -0.41
ATG4D-211ENST00000589753 HIF1ANQ9NWT6 349 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 TAS2R3Q9NYW6 316 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 ONECUT1Q9UBC0 465 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 INSIG2Q9Y5U4 225 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 CCDC168Q8NDH2 2452 aa12.51□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF729A6NN14 1252 aaPredicted RBP12.5□□□□□ -0.41
ATG4D-211ENST00000589753 SSX5O60225 188 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 INHBBP09529 407 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF728P0DKX0 622 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 CCL3L1P16619 93 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF16P17020 682 aaPredicted RBP12.5□□□□□ -0.41
ATG4D-211ENST00000589753 RCC1P18754 421 aaPredicted RBP12.5□□□□□ -0.41
ATG4D-211ENST00000589753 GZMHP20718 246 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 DTYMKP23919 212 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 ETV6P41212 452 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 GUCA2AQ02747 115 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 CR1LQ2VPA4 569 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 DCAF12L2Q5VW00 463 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF880Q6PDB4 577 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 TRAT1Q6PIZ9 186 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 Q6ZPA2 131 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 GAL3ST2Q9H3Q3 398 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 SCPEP1Q9HB40 452 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 Q9N2K0 584 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 KCNIP1Q9NZI2 227 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 OPN4Q9UHM6 478 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 MGAT4AQ9UM21 535 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 V9GYH0 126 aa12.5□□□□□ -0.41
ATG4D-211ENST00000589753 NOTCH2Q04721 2471 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 MALRD1Q5VYJ5 2156 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 YLPM1P49750 1951 aaKnown RBP12.49□□□□□ -0.41
ATG4D-211ENST00000589753 MEIOCA2RUB1 952 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 ORC5O43913 435 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 LPLP06858 475 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms