RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CLIC3O95833 236 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 SNRNP70P08621 437 aaKnown RBP11.4□□□□□ -0.58
VMP1-206ENST00000587945 FAM106CPP0CH98 169 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 C21orf33P30042 268 aaPredicted RBP11.4□□□□□ -0.58
VMP1-206ENST00000587945 SSTR5P35346 364 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 HNF4GQ14541 408 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 KHDC1LQ5JSQ8 128 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 RPL22L1Q6P5R6 122 aaKnown RBP11.4□□□□□ -0.58
VMP1-206ENST00000587945 ASCL4Q6XD76 172 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 C10orf67Q8IYJ2 551 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 DRAM1Q8N682 238 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 SUMF2Q8NBJ7 301 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 WFDC9Q8NEX5 89 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 Q8NFD4 153 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 OR13C5Q8NGS8 318 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 TMEM106AQ96A25 262 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 CPNE2Q96FN4 548 aaPredicted RBP11.4□□□□□ -0.58
VMP1-206ENST00000587945 DPCDQ9BVM2 203 aaPredicted RBP11.4□□□□□ -0.58
VMP1-206ENST00000587945 NCOR1P1Q9H4R4 102 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 LINC00574Q9H8X3 128 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 ST3GAL6Q9Y274 331 aa11.4□□□□□ -0.58
VMP1-206ENST00000587945 TSSC4Q9Y5U2 329 aaPredicted RBP11.4□□□□□ -0.58
VMP1-206ENST00000587945 A0A1W2PPI3 338 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 FAM90A18PA6NE21 464 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 FAM90A16PA6NEW6 464 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 FAM90A20PA6NIJ5 464 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 FAM90A9PA6NNJ1 464 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 FAM90A12PA8MX19 464 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 FAM90A5PA8MXJ8 464 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 NPIPB11E5RHQ5 1161 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 PF4P02776 101 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 CD2P06729 351 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 FAM90A15PP0C7V4 464 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 FAM90A13PP0C7W8 464 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 FAM90A14PP0C7W9 464 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 FAM90A24PP0C7X0 464 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 LOXL3P58215 753 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 HES1Q14469 280 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 DDI2Q5TDH0 399 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 ZNF329Q86UD4 541 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 ZNF555Q8NEP9 628 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 OR4X2Q8NGF9 303 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 UBALD1Q8TB05 177 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.39□□□□□ -0.59
VMP1-206ENST00000587945 CLEC2DQ9UHP7 191 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 MOB4Q9Y3A3 225 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 AMMECR1Q9Y4X0 333 aaPredicted RBP11.39□□□□□ -0.59
VMP1-206ENST00000587945 HSPE1-MOB4S4R3N1 261 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 KIAA2026Q5HYC2 2103 aa11.39□□□□□ -0.59
VMP1-206ENST00000587945 A0A1W2PP11 408 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 M0QZK8 103 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 GEMIN2O14893 280 aaKnown RBP11.38□□□□□ -0.59
VMP1-206ENST00000587945 OR7C1O76099 320 aaPredicted RBP11.38□□□□□ -0.59
VMP1-206ENST00000587945 LALBAP00709 142 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 DCKP27707 260 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 ZNF93P35789 620 aaPredicted RBP11.38□□□□□ -0.59
VMP1-206ENST00000587945 KCNJ3P48549 501 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 PPP3R1P63098 170 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 MADCAM1Q13477 382 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 CCDC58Q4VC31 144 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 FAM53AQ6NSI3 398 aaPredicted RBP11.38□□□□□ -0.59
VMP1-206ENST00000587945 TMPRSS11AQ6ZMR5 421 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 THNSL2Q86YJ6 484 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 OSR2Q8N2R0 312 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 OR10X1Q8NGY0 326 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 OR52N1Q8NH53 320 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 HAVCR2Q8TDQ0 301 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 NOL4LQ96MY1 436 aaPredicted RBP11.38□□□□□ -0.59
VMP1-206ENST00000587945 METTL9Q9H1A3 318 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 TMEM138Q9NPI0 162 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 PCDHB16Q9NRJ7 776 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 SMPD3Q9NY59 655 aaPredicted RBP11.38□□□□□ -0.59
VMP1-206ENST00000587945 ZNF281Q9Y2X9 895 aa11.38□□□□□ -0.59
VMP1-206ENST00000587945 MAGEA13PA6NCF6 341 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 OGG1O15527 345 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 TMEM11P17152 192 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 SERPINA2P20848 420 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 BDKRB2P30411 391 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 RBM11P57052 281 aaKnown RBP11.37□□□□□ -0.59
VMP1-206ENST00000587945 PAX5Q02548 391 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 ZFP41Q8N8Y5 198 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 CCDC107Q8WV48 283 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 BABAM2Q9NXR7 383 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 IL36GQ9NZH8 169 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 LINC00527Q9UJ94 153 aa11.37□□□□□ -0.59
VMP1-206ENST00000587945 IGHV3-72A0A0B4J1Y9 119 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 PSMB11A5LHX3 300 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 MPIG6BO95866 241 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 IGKV1D-33P01593 117 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 IGKV1-33P01594 117 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 CSTBP04080 98 aaKnown RBP11.36□□□□□ -0.59
VMP1-206ENST00000587945 REG1BP48304 166 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 RAB7AP51149 207 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 LRRC36Q1X8D7 754 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 SLC22A6Q4U2R8 563 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 NHLRC3Q5JS37 347 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 ATAD3CQ5T2N8 411 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 C18orf65Q6ZTR6 163 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 C5orf56Q8N8D9 126 aa11.36□□□□□ -0.59
VMP1-206ENST00000587945 CYGBQ8WWM9 190 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms