RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CTSZQ9UBR2 303 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 CLN8Q9UBY8 286 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 ZNF230Q9UIE0 474 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-216ENST00000583804 KCNK7Q9Y2U2 307 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 MAB21L2Q9Y586 359 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 MYO9AB2RTY4 2548 aa9.11□□□□□ -0.95
TOP3A-216ENST00000583804 TRAV24A0A0B4J272 114 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 TMEM82A0PJX8 343 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 FOXI3A8MTJ6 420 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-216ENST00000583804 MFNGO00587 321 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 SIGLEC5O15389 551 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 GSTZ1O43708 216 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-216ENST00000583804 SSX5O60225 188 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 NDUFB7P17568 137 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 RAB25P57735 213 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 SEC61A1P61619 476 aaKnown RBP9.1□□□□□ -0.95
TOP3A-216ENST00000583804 GNB2P62879 340 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 EDDM3AQ14507 147 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 TATDN3Q17R31 274 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 MPV17LQ2QL34 196 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 PLA1AQ53H76 456 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 ESCO2Q56NI9 601 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 NHLRC3Q5JS37 347 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 ZNF57Q68EA5 555 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-216ENST00000583804 C5orf24Q7Z6I8 188 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 LINC00596Q86U02 117 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 CIARTQ8N365 385 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-216ENST00000583804 FAM89BQ8N5H3 189 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 GVQW1Q8N7I0 195 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 ST8SIA4Q92187 359 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 THAP7Q9BT49 309 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-216ENST00000583804 LPAR2Q9HBW0 351 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 CHMP1AQ9HD42 196 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-216ENST00000583804 SLC25A10Q9UBX3 287 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-216ENST00000583804 ALG5Q9Y673 324 aa9.1□□□□□ -0.95
TOP3A-216ENST00000583804 MAP1AP78559 2803 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-216ENST00000583804 A0A096LNT2 108 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 F5H0A9 414 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-216ENST00000583804 K7N7A8 449 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 SLC33A1O00400 549 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-216ENST00000583804 PHF1O43189 567 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-216ENST00000583804 TPPPO94811 219 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 TK1P04183 234 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 GSTT2P0CG29 244 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 GSTT2BP0CG30 244 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 PRSS3P35030 304 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 GRK1Q15835 563 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 FAM189A2Q15884 450 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 C17orf107Q6ZR85 190 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 NOXA1Q86UR1 476 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 TPRX1Q8N7U7 411 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 PPP1R35Q8TAP8 253 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 UBALD1Q8TB05 177 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 CCDC107Q8WV48 283 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 H1FXQ92522 213 aaKnown RBP9.09□□□□□ -0.95
TOP3A-216ENST00000583804 UPRTQ96BW1 309 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 SNX22Q96L94 193 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 DPCDQ9BVM2 203 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-216ENST00000583804 SSBP3Q9BWW4 388 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-216ENST00000583804 FAM234AQ9H0X4 552 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 SEBOXQ9HB31 216 aaPredicted RBP9.09□□□□□ -0.95
TOP3A-216ENST00000583804 COPZ2Q9P299 210 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 KLK11Q9UBX7 282 aa9.09□□□□□ -0.95
TOP3A-216ENST00000583804 C7orf66A4D0T2 115 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A10PA6NDY2 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A18PA6NE21 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A16PA6NEW6 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A20PA6NIJ5 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A8PA6NJQ4 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A7PA6NKC0 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A22PA8MWA6 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A12PA8MX19 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A5PA8MXJ8 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A23PA8MXZ1 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM157AC9JC47 383 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 MCRIP1C9JLW8 97 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 INMT-MINDY4F8WBC2 141 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 H3BUI4 141 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 PSPNO60542 156 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 ZNF737O75373 536 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 SCGNO76038 276 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 CSN2P05814 226 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A15PP0C7V4 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A13PP0C7W8 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A14PP0C7W9 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAM90A24PP0C7X0 464 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FUT3P21217 361 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 LMO1P25800 156 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 GDNFP39905 211 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 NKX2-5P52952 324 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-216ENST00000583804 RAG2P55895 527 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 RRAS2P62070 204 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-216ENST00000583804 LCN2P80188 198 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 CDK10Q15131 360 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 WDR25Q64LD2 544 aaPredicted RBP9.08□□□□□ -0.96
TOP3A-216ENST00000583804 OR52W1Q6IF63 320 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 FAAP20Q6NZ36 180 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 ZNF841Q6ZN19 808 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 OR4S1Q8NGB4 309 aa9.08□□□□□ -0.96
TOP3A-216ENST00000583804 OR4K15Q8NH41 348 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms