RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 KRTDAPP60985 99 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 HSF1Q00613 529 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 TMEM267Q0VDI3 215 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-212ENST00000574799 RTP5Q14D33 572 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 CXorf66Q5JRM2 361 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-212ENST00000574799 MYPOPQ86VE0 399 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-212ENST00000574799 DYRK2Q92630 601 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 ACY3Q96HD9 319 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 RSG1Q9BU20 258 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 RTN4RQ9BZR6 473 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 CUTCQ9NTM9 273 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 AURKAIP1Q9NWT8 199 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-212ENST00000574799 NAT8Q9UHE5 227 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 RER1O15258 196 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 CD55P08174 381 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 LINC00614P0C842 121 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 CEACAM1P13688 526 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 GPR3P46089 330 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 PSMB3P49720 205 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 FAM3BP58499 235 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-212ENST00000574799 DCAF10Q5QP82 559 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 FAM78BQ5VT40 261 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 SPSB3Q6PJ21 355 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 DOK3Q7L591 496 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 MCEMP1Q8IX19 187 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 OR8B12Q8NGG6 310 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 RNF133Q8WVZ7 376 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 LOC102723971A0A1B0GUV8 181 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 MAP1LC3B2A6NCE7 125 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 B4DGG1 531 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 PLPP3O14495 311 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 PITX3O75364 302 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 OR2J2O76002 312 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 OR7C1O76099 320 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-212ENST00000574799 RAB7AP51149 207 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 THEM4Q5T1C6 240 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 C1QL2Q7Z5L3 287 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 PTPMT1Q8WUK0 201 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-212ENST00000574799 CIB3Q96Q77 187 aaPredicted RBP8.33□□□□□ -1.08
CCDC40-212ENST00000574799 GPHA2Q96T91 129 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 SCRT1Q9BWW7 348 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 MAP1LC3BQ9GZQ8 125 aa8.33□□□□□ -1.08
CCDC40-212ENST00000574799 MCTS1Q9ULC4 181 aaKnown RBP8.33□□□□□ -1.08
CCDC40-212ENST00000574799 SPTBN2O15020 2390 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 TRBV24-1A0A075B6N3 115 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 RPL36A-HNRNPH2H7BZ11 118 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 CHST1O43916 411 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 ZNF737O75373 536 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 RBMXL2O75526 392 aaKnown RBP8.32□□□□□ -1.08
CCDC40-212ENST00000574799 MYF5P13349 255 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 AADACP22760 399 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 CHRNB4P30926 498 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 ZNF133P52736 654 aaPredicted RBP8.32□□□□□ -1.08
CCDC40-212ENST00000574799 SRPXP78539 464 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 TMEM187Q14656 261 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 C5orf24Q7Z6I8 188 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 CMTM2Q8TAZ6 248 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 SERINC1Q9NRX5 453 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 PIGLQ9Y2B2 252 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 CHD3Q12873 2000 aaKnown RBP8.32□□□□□ -1.08
CCDC40-212ENST00000574799 IFNL4K9M1U5 179 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 SPRY1O43609 319 aaPredicted RBP8.32□□□□□ -1.08
CCDC40-212ENST00000574799 SERPINA7P05543 415 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 SERPINE2P07093 398 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 IAPPP10997 89 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCDC40-212ENST00000574799 SAPCD1Q5SSQ6 148 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 SLC25A26Q70HW3 274 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 H1FNTQ75WM6 255 aaPredicted RBP8.32□□□□□ -1.08
CCDC40-212ENST00000574799 TECTBQ96PL2 329 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 OR2J1Q9GZK6 312 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 ZDHHC11Q9H8X9 412 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 SELEP16581 610 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 IL11P20809 199 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 IGFBP4P22692 258 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 S100A7P31151 101 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 CARD18P57730 90 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 RANP62826 216 aaKnown RBP8.32□□□□□ -1.08
CCDC40-212ENST00000574799 QRFPP83859 136 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 C1orf194Q5T5A4 169 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 FNDC7Q5VTL7 733 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 SLC25A45Q8N413 288 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 OR4C5Q8NGB2 326 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 RNASEH2CQ8TDP1 164 aaKnown RBP8.32□□□□□ -1.08
CCDC40-212ENST00000574799 LPAR2Q9HBW0 351 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 SDF2L1Q9HCN8 221 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 TMEM9BQ9NQ34 198 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 FAM206AQ9NX38 181 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 RNF24Q9Y225 148 aa8.32□□□□□ -1.08
CCDC40-212ENST00000574799 LY6G6EA0A0G2JKS1 128 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 C3orf85A0A1B0GTC6 90 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 A0A1B0GW64 132 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 TP53I11O14683 189 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 LCATP04180 440 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 UCP2P55851 309 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 PRSS12P56730 875 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 GRINAQ7Z429 371 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 ZNF573Q86YE8 665 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 LIPHQ8WWY8 451 aa8.31□□□□□ -1.08
CCDC40-212ENST00000574799 BORCS8Q96FH0 119 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms