RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 C1orf194Q5T5A4 169 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 ZNF774Q6NX45 483 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 TMEM170AQ8WVE7 144 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 RPUSD4Q96CM3 377 aaKnown RBP12.43□□□□□ -0.42
SMG6-215ENST00000574501 SPIN2AQ99865 258 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 SPIN2BQ9BPZ2 258 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 PYGO2Q9BRQ0 406 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 Q9N2K0 584 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 PLA2G3Q9NZ20 509 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 A0A1W2PNV4 684 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 TRAF3IP2O43734 574 aaPredicted RBP12.43□□□□□ -0.42
SMG6-215ENST00000574501 IFNA5P01569 189 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 RPLP1P05386 114 aaKnown RBP12.43□□□□□ -0.42
SMG6-215ENST00000574501 OR2AE1Q8NHA4 323 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 PLPPR1Q8TBJ4 325 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 OR5B12Q96R08 314 aa12.43□□□□□ -0.42
SMG6-215ENST00000574501 OPN3Q9H1Y3 402 aaPredicted RBP12.43□□□□□ -0.42
SMG6-215ENST00000574501 LRRC3CA6NJW4 275 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 TMEM210A6NLX4 147 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 H7BYZ3 331 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 METTL15P1P0C7V9 234 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 UCP3P55916 312 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 YPEL5P62699 121 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 ID3Q02535 119 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 SNAI3Q3KNW1 292 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 OR2V1Q8NHB1 315 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 MRGPRX1Q96LB2 322 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 TMEM56Q96MV1 263 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 HIPK2Q9H2X6 1198 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 SLC7A10Q9NS82 523 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 NAT8Q9UHE5 227 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 TMEM56-RWDD3S4R434 201 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 PCDH15Q96QU1 1955 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 FOSL2P15408 326 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 CD33P20138 364 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 CLDN17P56750 224 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 IL24Q13007 206 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 TMEM241Q24JQ0 296 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 RSPO1Q2MKA7 263 aaPredicted RBP12.42□□□□□ -0.42
SMG6-215ENST00000574501 BSXQ3C1V8 233 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 ZNF818PQ6ZRF7 136 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 GABRG3Q99928 467 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 ARHGAP21Q5T5U3 1957 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 THADAQ6YHU6 1953 aa12.42□□□□□ -0.42
SMG6-215ENST00000574501 LRP4O75096 1905 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 ZNF705FA8MVS1 300 aaPredicted RBP12.41□□□□□ -0.42
SMG6-215ENST00000574501 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
SMG6-215ENST00000574501 ZNF705DP0CH99 300 aaPredicted RBP12.41□□□□□ -0.42
SMG6-215ENST00000574501 ZNF705BP0CI00 300 aaPredicted RBP12.41□□□□□ -0.42
SMG6-215ENST00000574501 IRF2P14316 349 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 CCKARP32238 428 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 RPS18P62269 152 aaKnown RBP12.41□□□□□ -0.42
SMG6-215ENST00000574501 RPL23P62829 140 aaKnown RBP12.41□□□□□ -0.42
SMG6-215ENST00000574501 SRPXP78539 464 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 C17orf67Q0P5P2 114 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 BATFQ16520 125 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 GAPTQ8N292 157 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 GBGT1Q8N5D6 347 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 ZNF441Q8N8Z8 693 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 DIRC2Q96SL1 478 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 WDR87Q6ZQQ6 2873 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 KIR2DL5BA0A0G2JN68 375 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 KIR2DL5BA0A0G2JPC4 375 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 A0A0U1RQV5 110 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 HMGB3O15347 200 aaKnown RBP12.41□□□□□ -0.42
SMG6-215ENST00000574501 CAPZBP47756 277 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 FAM3BP58499 235 aaPredicted RBP12.41□□□□□ -0.42
SMG6-215ENST00000574501 DLX2Q07687 328 aaPredicted RBP12.41□□□□□ -0.42
SMG6-215ENST00000574501 IZUMO4Q1ZYL8 232 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 ARSJQ5FYB0 599 aaPredicted RBP12.41□□□□□ -0.42
SMG6-215ENST00000574501 NMSQ5H8A3 153 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 ACTL10Q5JWF8 245 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 TGIF2LYQ8IUE0 185 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 KIR2DL5AQ8N109 375 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 P2RX4Q99571 388 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 NAGKQ9UJ70 344 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 ST3GAL6Q9Y274 331 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 RNF115Q9Y4L5 304 aa12.41□□□□□ -0.42
SMG6-215ENST00000574501 IGKV1-12A0A0C4DH73 117 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 ZNF737O75373 536 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 IGKV1D-12P01611 117 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 EDN3P14138 238 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 EIF3IQ13347 325 aaKnown RBP12.4□□□□□ -0.42
SMG6-215ENST00000574501 SHHQ15465 462 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 PARM1Q6UWI2 310 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 TMEM256Q8N2U0 113 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 OR5T1Q8NG75 326 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 SCGB1C1Q8TD33 95 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 ZNF442Q9H7R0 627 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 OBP2AQ9NY56 170 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 TAAR3PQ9P1P4 343 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 MRPS18CQ9Y3D5 142 aaKnown RBP12.4□□□□□ -0.42
SMG6-215ENST00000574501 NUPR1O60356 82 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 HPRT1P00492 218 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 TNFRSF4P43489 277 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 TESK1Q15569 626 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 MRGPRGQ86SM5 289 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 ZNF573Q86YE8 665 aa12.4□□□□□ -0.42
SMG6-215ENST00000574501 CALHM1Q8IU99 346 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms