RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 OR6C3Q9NZP0 311 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF581Q9P0T4 197 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 CTSZQ9UBR2 303 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 KIF25Q9UIL4 384 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 PCNX1Q96RV3 2341 aa5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 RAI1Q7Z5J4 1906 aaPredicted RBP5.48□□□□□ -1.53
CTDNEP1-204ENST00000570484 IGHV4-30-2A0A087WSY4 118 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 A0A1B0GW55 424 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 TMEM82A0PJX8 343 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 ODAMA1E959 279 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 FOXI3A8MTJ6 420 aaPredicted RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 CTDSPLO15194 276 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 SPINT2O43291 252 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 FOXH1O75593 365 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 RBBP9O75884 186 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 ECDO95905 644 aaPredicted RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 FCGR3AP08637 254 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 GSTT2BP0CG30 244 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 DUX4L2P0CJ85 424 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 DUX4L3P0CJ86 424 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 DUX4L4P0CJ87 422 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 DUX4L5P0CJ88 424 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 DUX4L6P0CJ89 424 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 DUX4L7P0CJ90 424 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 PTHLHP12272 177 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 USF1P22415 310 aaPredicted RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 DTYMKP23919 212 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 CD40LGP29965 261 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 ERP29P30040 261 aaKnown RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 FAUP35544 74 aaKnown RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 PPP5CP53041 499 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 TMEM50BP56557 158 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 TAS2R46P59540 309 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 RPL31P62899 125 aaKnown RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 HLA-DRB3P79483 266 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 DGCR2P98153 550 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 SSBP1Q04837 148 aaKnown RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 AESQ08117 197 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 LSAMPQ13449 338 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF79Q15937 498 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 CHRFAM7AQ494W8 412 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 ACTBL2Q562R1 376 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 RSBN1Q5VWQ0 802 aaPredicted RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 CD276Q5ZPR3 534 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 OLFML2AQ68BL7 652 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF57Q68EA5 555 aaPredicted RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 SLC35E4Q6ICL7 350 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 DUX4L9Q6RFH8 374 aaPredicted RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 PRSS57Q6UWY2 283 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 LYPD2Q6UXB3 125 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 BTNL3Q6UXE8 466 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 ZNF497Q6ZNH5 498 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 BIVMQ86UB2 503 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 MFSD4AQ8N468 514 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 PRR18Q8N4B5 295 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 TOMM5Q8N4H5 51 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 TPRX1Q8N7U7 411 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 OR4K15Q8NH41 348 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 PLPPR1Q8TBJ4 325 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 MRGPRDQ8TDS7 321 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 COQ2Q96H96 371 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 Q96MF0 132 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 FOXC2Q99958 501 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 HDHD3Q9BSH5 251 aaPredicted RBP5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 SRRQ9GZT4 340 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 TAS2R8Q9NYW2 309 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 DUX4Q9UBX2 424 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 MAB21L2Q9Y586 359 aa5.47□□□□□ -1.53
CTDNEP1-204ENST00000570484 GCN1Q92616 2671 aaKnown RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 LOC105371242A0A075B767 164 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 IGHV4-61A0A0C4DH41 118 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 hCG_1809904A0A1W2PP81 198 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 A0A1W2PPE2 198 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 A0A1W2PR64 198 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 A0A1W2PRV1 198 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 VWC2LB2RUY7 222 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF736B4DX44 427 aaPredicted RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 F5H0A9 414 aaPredicted RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 J3QRK9 145 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 PHF1O43189 567 aaPredicted RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 HSPA12AO43301 675 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 GSTZ1O43708 216 aaPredicted RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 ENSAO43768 121 aaKnown RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 HLA-DQB1P01920 261 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 FCER2P06734 321 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 MELTFP08582 738 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 TBPP20226 339 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 IL2RGP31785 369 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 GDNFP39905 211 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR3A3P47888 321 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 GLIPR1P48060 266 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 TAS2R19P59542 299 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 DEFA1P59665 94 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 DEFA3P59666 94 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 PAX5Q02548 391 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 MEF2CQ06413 473 aaPredicted RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 RNASE10Q5GAN6 216 aaKnown RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 WDR25Q64LD2 544 aaPredicted RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 BTN2A1Q7KYR7 527 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 RTN4RL2Q86UN3 420 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms