RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 DUS4LO95620 317 aaKnown RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 DIRAS3O95661 229 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 PPYP01298 95 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 PIGPP57054 158 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 RAP2BP61225 183 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 CCL8P80075 99 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 AESQ08117 197 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 FAM201AQ5SY85 155 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 ZNF660Q6AZW8 331 aaPredicted RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 FAHD2BQ6P2I3 314 aaPredicted RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 DHRS11Q6UWP2 260 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 SGPP2Q8IWX5 399 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 TPRX1Q8N7U7 411 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 PLPPR1Q8TBJ4 325 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 MITD1Q8WV92 249 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 SECTM1Q8WVN6 248 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 FAHD2AQ96GK7 314 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 KIRREL1Q96J84 757 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 ESRP2Q9H6T0 727 aaKnown RBP5.96□□□□□ -1.46
SMG1-215ENST00000568239 OPN4Q9UHM6 478 aa5.96□□□□□ -1.46
SMG1-215ENST00000568239 FXYD6-FXYD2A0A087WZ82 144 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 VSTM5A8MXK1 200 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 SFT2D2O95562 160 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 IGHV1-46P01743 117 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 PPP3CBP16298 524 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 EGR1P18146 543 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 TNFSF4P23510 183 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 SSTR2P30874 369 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 CD200P41217 278 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 ECI1P42126 302 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 ADORA2A-AS1P86434 159 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 COL10A1Q03692 680 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 EDDM3AQ14507 147 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 CDSNQ15517 529 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 SURF2Q15527 256 aaPredicted RBP5.95□□□□□ -1.46
SMG1-215ENST00000568239 ADIPOQQ15848 244 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 SP6Q3SY56 376 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 DEFB108BQ8NET1 73 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 TMEM185AQ8NFB2 350 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 NUP37Q8NFH4 326 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 COQ8AQ8NI60 647 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 ZFAND1Q8TCF1 268 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 NEUROG1Q92886 237 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 FXYD6Q9H0Q3 95 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 TLNRD1Q9H1K6 362 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 METTL8Q9H825 291 aaKnown RBP5.95□□□□□ -1.46
SMG1-215ENST00000568239 METRNQ9UJH8 293 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 RBM7Q9Y580 266 aaKnown RBP5.95□□□□□ -1.46
SMG1-215ENST00000568239 NPTNQ9Y639 398 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 DYSFO75923 2080 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 CEACAM18A8MTB9 384 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 ADAP1O75689 374 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 OR2A4O95047 310 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 HOXB5P09067 269 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 MDH2P40926 338 aaKnown RBP5.95□□□□□ -1.46
SMG1-215ENST00000568239 SUPT4H1P63272 117 aaKnown RBP5.95□□□□□ -1.46
SMG1-215ENST00000568239 SORDQ00796 357 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 HERPUD1Q15011 391 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 IQCF2Q8IXL9 164 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 ZNF565Q8N9K5 539 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 OR11L1Q8NGX0 322 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 OR10J5Q8NHC4 309 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 RTN4IP1Q8WWV3 396 aaPredicted RBP5.95□□□□□ -1.46
SMG1-215ENST00000568239 OR2A7Q96R45 310 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 HES4Q9HCC6 221 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 KCNJ16Q9NPI9 418 aa5.95□□□□□ -1.46
SMG1-215ENST00000568239 ZFYVE26Q68DK2 2539 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.94□□□□□ -1.46
SMG1-215ENST00000568239 TUBAL3A6NHL2 446 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 H7C1Q1 480 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 ERVH48-1M5A8F1 160 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 ARPC5O15511 151 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 CYB5R3P00387 301 aaPredicted RBP5.94□□□□□ -1.46
SMG1-215ENST00000568239 GLAP06280 429 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 CTSDP07339 412 aaPredicted RBP5.94□□□□□ -1.46
SMG1-215ENST00000568239 TLE1Q04724 770 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 LY6G6FQ5SQ64 297 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 SSX8Q7RTT4 187 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 C9orf62Q8N4C0 152 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 GCSAMQ8N6F7 178 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 OR5M8Q8NGP6 311 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 RNASE6Q93091 150 aaKnown RBP5.94□□□□□ -1.46
SMG1-215ENST00000568239 LRRC46Q96FV0 321 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 GPHA2Q96T91 129 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 IFT22Q9H7X7 185 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 SLC2A9Q9NRM0 540 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 COMMD9Q9P000 198 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 KIF25Q9UIL4 384 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 ERRFI1Q9UJM3 462 aaPredicted RBP5.94□□□□□ -1.46
SMG1-215ENST00000568239 KCNIP3Q9Y2W7 256 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 DSCAMO60469 2012 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 AKAP6Q13023 2319 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 IGKV1-6A0A0C4DH72 117 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 SRRM5B3KS81 715 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 G3V3Q6 166 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 M0R233 179 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 HSD17B6O14756 317 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 IFNA2P01563 188 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 CD3EP07766 207 aa5.94□□□□□ -1.46
SMG1-215ENST00000568239 ACAA1P09110 424 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms