RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 SIRPB1O00241 398 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 PRAF2O60831 178 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 SIX6O95475 246 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 IGHV3-13P01766 116 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 OR4E1P0C645 316 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 GSTT2P0CG29 244 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 FUT3P21217 361 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 ZBTB25P24278 435 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 GCH1P30793 250 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 GLRXP35754 106 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 PMELP40967 661 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 RBPJQ06330 500 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 BAMBIQ13145 260 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 PPP1R1AQ13522 171 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 IL13RA2Q14627 380 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 MEF2DQ14814 521 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 KCNJ8Q15842 424 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 FAM189A2Q15884 450 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 MPV17LQ2QL34 196 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 Q5BKY6 102 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 METTL11BQ5VVY1 283 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 DCAF12L2Q5VW00 463 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 SLC22A25Q6T423 547 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 WDR82Q6UXN9 313 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 TMED4Q7Z7H5 227 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 TGIF2LYQ8IUE0 185 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 FAM58AQ8N1B3 248 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 Q8N1X5 172 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 SUMF2Q8NBJ7 301 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 POC1AQ8NBT0 407 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 ZBTB34Q8NCN2 500 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 OR11H4Q8NGC9 324 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 OR5AP2Q8NGF4 316 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 OR5H2Q8NGV7 314 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 PLPPR1Q8TBJ4 325 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 MRPL30Q8TCC3 161 aaKnown RBP4.81□□□□□ -1.64
SF3B3-210ENST00000567654 RND1Q92730 232 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 NEUROG1Q92886 237 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 MUCL1Q96DR8 90 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 WFIKKN1Q96NZ8 548 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 PRRT1Q99946 306 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 NRIP2Q9BQI9 281 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 TLNRD1Q9H1K6 362 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 MED28Q9H204 178 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 CXXC4Q9H2H0 198 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 C5orf66Q9H5L9 145 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF442Q9H7R0 627 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 HES4Q9HCC6 221 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 UFSP2Q9NUQ7 469 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 ELOVL5Q9NYP7 299 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 EHFQ9NZC4 300 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 PIPOXQ9P0Z9 390 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 MGAT4CQ9UBM8 478 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 ZNF69Q9UC07 566 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 ANXA10Q9UJ72 324 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 PLEKHA6Q9Y2H5 1048 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 NPTNQ9Y639 398 aa4.81□□□□□ -1.64
SF3B3-210ENST00000567654 USF3Q68DE3 2245 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 IGKV1-6A0A0C4DH72 117 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A10PA6NDY2 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A18PA6NE21 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A16PA6NEW6 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A20PA6NIJ5 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A8PA6NJQ4 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A7PA6NKC0 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 TMEM210A6NLX4 147 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 CEACAM18A8MTB9 384 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A22PA8MWA6 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 SNRPGP15A8MWD9 76 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A12PA8MX19 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A5PA8MXJ8 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A23PA8MXZ1 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 SLC33A1O00400 549 aaPredicted RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 CCL21O00585 134 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ABCD4O14678 606 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 HS3ST1O14792 307 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 SSNA1O43805 119 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 PTBP3O95758 552 aaKnown RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 OR2H2O95918 312 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 NAPSAO96009 420 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 PLAUP00749 431 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 CRYAAP02489 173 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 ELANEP08246 267 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 SCTP09683 121 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A15PP0C7V4 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A13PP0C7W8 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A14PP0C7W9 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 FAM90A24PP0C7X0 464 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 RPS2P15880 293 aaKnown RBP4.8□□□□□ -1.64
SF3B3-210ENST00000567654 TBPP20226 339 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 DTYMKP23919 212 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 CD200P41217 278 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 CBX5P45973 191 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 NPY4RP50391 375 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 IFITM2Q01629 132 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 BSPH1Q075Z2 132 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 DHRS2Q13268 280 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 HERPUD1Q15011 391 aa4.8□□□□□ -1.64
SF3B3-210ENST00000567654 CDK10Q15131 360 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms